Tigriopus californicus (tidepool copepod): 131882983
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Entry
131882983 CDS
T09700
Name
(RefSeq) protein pelota-like
KO
K06965
protein pelota
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131882983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131882983
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131882983
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Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_2
eRF1_3
HTH_57
K1-lyase_Rider
Motif
Other DBs
NCBI-GeneID:
131882983
NCBI-ProteinID:
XP_059086279
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Position
7:9194517..9195871
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AA seq
385 aa
AA seq
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MKLVHRNLEKNASGSLTLIPEETEDMWHVFNLISEGDQVRASTIRKVTTESATGSTTSNR
VRTTLTICVEDIDFDTQACMLRLKGRNVAENAYVKMGAYHTLDVEPNRKLTLEKSEWDSV
HLDRIELATDPVKHAEVAAIVMQEGLAHICLVTSSMTIVRSKIDVPIPRKRRGNTTNHDK
SLQRFYDNVLQAALRHVNFEVVKAVIVASPGFTRDQFMDFVWQYAARNETKILFENRAKF
LSVHASSGFAHALNEVLRDPVVLNRLSDTKAADEVKALETFFKTLQNDPTKAYYGERHVQ
LACEAQAIETLLISDQLFRAQDVAQRRKFVKLVDDVQDSGGEVKLFSSLHESGKQLDQLT
GLCAILRFPMPELDEDDSDDEPDSD
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggttcaccggaatttggagaaaaacgcgagcggctcgctcacgttgatcccc
gaagaaaccgaagacatgtggcacgtgttcaacctgatctcggagggcgaccaagtgcgg
gcctcaaccatccgcaaagtgaccacggaatcggccacaggctccactaccagtaatcgg
gtgcgcaccacgctcaccatttgcgtggaagacatcgatttcgacacacaagcctgcatg
ctccgcctcaagggacggaacgtggccgaaaatgcctatgtcaagatgggcgcctatcac
acgctagacgtggagcccaaccggaagctaaccttggagaagtccgagtgggattcggtt
cacttggaccgcatcgaattggccacggacccggtaaagcacgctgaggtagcggctatt
gtcatgcaggaggggctggctcatatttgtttggtcacgtcgtctatgacgattgtccgc
agcaagattgatgtacccattccgcggaaacgccgcggaaacaccactaatcacgataaa
tcccttcagcgcttctacgataacgtcttgcaagctgcattgcggcacgtcaatttcgag
gtcgtcaaagctgtgatcgtggcctcgcccgggttcacacgcgatcagttcatggatttc
gtgtggcaatacgcggcgcgcaacgagaccaagatattattcgagaatcgggccaagttc
ttgtctgtccacgcctccagcgggtttgctcatgccctcaatgaagtgctgcgcgatcct
gtggtgttaaaccgactttccgatacgaaagccgctgacgaggtcaaggccttggaaacg
tttttcaaaaccctgcaaaatgatccgactaaggcctattacggtgagcgacacgtgcaa
ctggcgtgtgaggcccaggccattgaaactctcctcatatctgaccagttatttcgggcc
caagatgtggctcaaagacggaaatttgtgaaactggtcgatgatgtgcaagatagtggc
ggtgaagtgaaattattctcgtcgttgcacgaaagtggcaaacagttagaccaactcacg
ggtctatgtgcgattttacggtttcccatgcccgaactggacgaggatgacagcgatgat
gaaccagattcggattaa
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