KEGG   Tigriopus californicus (tidepool copepod): 131883007
Entry
131883007         CDS       T09700                                 
Name
(RefSeq) DNA damage-binding protein 2-like
  KO
K10140  DNA damage-binding protein 2
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03420  Nucleotide excision repair
tcf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    131883007
  09124 Replication and repair
   03420 Nucleotide excision repair
    131883007
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tcf04121]
    131883007
   03400 DNA repair and recombination proteins [BR:tcf03400]
    131883007
Ubiquitin system [BR:tcf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     131883007
DNA repair and recombination proteins [BR:tcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      131883007
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WD40 WDR55 Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_IFT140_1st Beta-prop_RIG_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR19_1st NBCH_WD40 WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 131883007
NCBI-ProteinID: XP_059086319
LinkDB
Position
1:7278974..7281395
AA seq 453 aa
MGPKRKAAQLTRINNNEPIRAKNAAKKAKSKIDEDVENEPLPSGPSSLCSRNRVRPPAHL
VGVLQGHGHGLVGHFNLERFSRLPIIEEISHYGVFKSVTPFDTRTTSLAWHPSSPSLCAV
GSKWGDIMLWNYQADNFQNLEPGRGPGGSILAMKFDIENDCRLYTCSIDGKMAVQDFVGQ
KSRVFLSTDDWEHWYTSFDVSFTGGTVITGDNKGFVTLMTKDGEVVWRSRLHPKKVTNLQ
FSPREPYLLISTSVDNSVKVWDIRNIKDRKSALASLEHDKPVNSAYFNPVNGTRLLTTDQ
HSQLRVYRSPHWDLERLIPHPHRQFQHLTPIKATWHPLADIVLAGRYPHDQFPGYEAGEQ
RSVDFIDPDDGKMLFQLTQPGMNNIISLNLFSPSGDAMLSGMSSTVLIWKPKPKFEMDEK
LYKETESNIKDLMVEEWPEHRPKRAKNKKKTRT
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgggtcccaaacgtaaggctgctcaactgacccgcatcaataacaatgagcccattcgg
gctaagaatgcggccaagaaagcaaagtccaaaatcgatgaggatgtggagaatgagccg
ctcccatctggtccatcgtccttgtgttcgcggaatcgggtccgacctcccgctcattta
gtgggagtcctgcaaggtcacggccatggcctggtgggccatttcaatttggaacgcttc
tctcgcctgcccatcatcgaagaaatctcacactatggcgtgttcaagtcggtcacgccc
ttcgacacccggaccacgtccctggcgtggcatcccagctcgccctcattatgtgccgtg
ggctcgaaatggggcgatatcatgctgtggaactatcaagccgacaacttccagaactta
gaaccgggtcgaggaccgggtgggtcgatattggccatgaaatttgatattgagaacgat
tgccgcctttacacatgttcgattgacgggaaaatggccgttcaggatttcgtgggtcaa
aagagccgcgtattcttgagcaccgacgactgggagcattggtatacctcgttcgatgtg
tcctttaccgggggcacggttataaccggtgataacaagggcttcgtcacgttaatgacc
aaggacggagaagtggtttggcgttctcggcttcatcccaagaaggtcactaatctccaa
ttcagcccgcgagagccgtacctcttgatttccacctcggtggataattctgtcaaagtc
tgggatattcgaaacatcaaggaccgaaagagcgccttggcctctttagagcatgacaag
cccgtgaactcggcctatttcaaccctgtgaatgggacccgtcttctcaccactgaccag
cacagccaactgcgggtgtatcgctcgcctcattgggatctcgaacgcctcatacctcat
cctcatcggcaatttcagcatctcacccctattaaagccacgtggcatcctttggcggac
attgtgttggccggacgctacccgcacgaccaatttccggggtatgaagccggtgagcaa
cgctcggtggattttatcgatcctgatgacgggaaaatgctgttccaactcactcaaccg
ggcatgaacaacatcatcagtctgaatttgttctcgccctcgggggatgccatgctctca
ggcatgtcctccacggtcctgatctggaagcccaaacccaaattcgagatggatgaaaaa
ttgtacaaagagactgagagcaacattaaggatctcatggtcgaagaatggcccgaacat
cgcccgaaacgagccaaaaacaagaagaagacccgtacctag

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