Tigriopus californicus (tidepool copepod): 131883014
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Entry
131883014 CDS
T09700
Name
(RefSeq) paired box pox-meso protein-like
KO
K09382
paired box protein 1/9
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131883014
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
131883014
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_29
Motif
Other DBs
NCBI-GeneID:
131883014
NCBI-ProteinID:
XP_059086324
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All DBs
Position
7:9541405..9549027
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AA seq
438 aa
AA seq
DB search
MDSQLSQYGEVNQLGGMFVNGRPLPNHIRVRIIELAQLGIRPCDISRQLRVSHGCVSKIL
ARYNETGSILPGAIGGSKPRVTTPKVVNFIRDLKIKDPGIFAWEIRDKLLSEGICDKYNV
PSVSSISRILRNKIGTLGAPGLSSRNDLGPHRHSAMSHINASHHMHHAAMENGLSHGKGF
MSCHPGDPNMTGPVSGAPSSHSNHSRYSTNGPQTHLGLGSRAPGPIRGHFPHSQGPQNNG
NNSTIRSTNSNNNNNNNNNNNNANHTNNNGNNAATSSANEHITHSDKKLSPGGNPHQTHT
SPPNLTRDPNSLWTPVSSAMATALSFPHSSPDYGGKEEQQLLHSGSVGATSPIGCDAFAH
MSAYGDPRGASKAAAAAAAAAAAAQNINYYMYLQSHQENADLLNHHFPPTSQVLGLPLPN
MPVHEDFSYMKNSSSHPQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggactctcagctgtcccagtatggagaggtgaatcaattgggcgggatgttcgtcaac
gggcgacctcttcccaatcacattcgggtccggataatcgaattggctcagctgggaatt
aggccttgtgacatttcacgacaacttcgggtctcgcatggatgcgtatcgaaaatttta
gcccgatacaacgagactggctcgattctgcccggagccattggaggaagcaagccacgg
gtgaccacgccgaaagtagtcaactttattcgcgacctcaagatcaaagatccagggatt
tttgcctgggagatccgagacaagctcttatcggagggcatatgcgacaaatataatgtt
ccgtccgtttcctcgatcagtcggattttacgaaataagattggaacccttggtgctcca
ggattgtcatctcgaaacgatttgggccctcatagacattcggccatgagccacatcaac
gcatcacatcatatgcatcatgccgcaatggaaaatggtttaagtcacggaaaagggttc
atgtcttgtcatccaggcgatcctaatatgactggtccggtttcgggtgctccctcatct
cattcaaaccattcgaggtattctaccaatgggccacaaacgcatctgggactcgggtct
agagcgcctgggcctattagaggccactttcctcacagtcaaggtcctcaaaataacggt
aataactcgaccatccggtcgactaatagcaacaacaacaacaacaacaataataataat
aacaacgccaaccataccaataacaacggcaataacgccgcaacatcctcagctaatgaa
catataactcattccgataagaagctttctccgggaggaaaccctcatcaaacccatacc
tctcctccaaacttgacaagagatcccaactcactttggactcccgtatcttcagccatg
gccacggctttgagttttcctcactcttcaccggattatggtggcaaagaagaacaacag
cttctgcatagtggatcggtgggagctacgtccccgattggatgtgatgcatttgctcat
atgagtgcttacggcgatccccgtggcgcgtcgaaagcggcggctgcagccgcagcagcc
gccgctgccgctcaaaatatcaattattacatgtatttgcaatctcatcaggaaaatgcg
gatcttttgaaccatcatttccctccaacttcgcaggtgctgggcctacctttgccaaac
atgccggttcacgaagatttcagttacatgaaaaacagttctagtcatccccaatag
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