Tigriopus californicus (tidepool copepod): 131883107
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Entry
131883107 CDS
T09700
Name
(RefSeq) sodium- and chloride-dependent neutral and basic amino acid transporter B(0+)-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
131883107
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131883107
Transporters [BR:
tcf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
131883107
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
131883107
NCBI-ProteinID:
XP_059086441
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Position
7:complement(13977099..13986593)
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AA seq
772 aa
AA seq
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MPSRKHSRSGFDYATPAVYYPTAPSSQYPPTGGYPIYGYNAASGYPHYGYGGPYNSAYGA
EGYHHYMRSYDPNYDAYFPEGPTVEDKWRNTYPYVPTSYTHTSSEGRNTGSRRRQGNQES
GHSLPREAGSRPTSNLKFAADELEEQTDEDRDHWGSQWEFIFSCIGLSVGIGNVWRFPYL
AFVNGGAAFLLPYFILLLIVGKPMYFMEVALGQFSQLGPFSVWRMTPIARGVGFAMCTLS
LIVAIYYNVVMGYCLHYMYFSFSWTLPWDTCDKDWADKATCYIPTDANSSCSASNSDQRC
QPASEQYWERFVLGLHNAPLMTYTESYNSTSDELVDRTYALSEFGNIGIIKWDLLLALFI
SWTVVFLCLSKGIKSSGKVVYFTATFPYLILLILLVRGLMLEGALEGIKFFFIPDWKKLL
DISVWRLAAEQMFFSLSVSWGGLIMFGSYNKFRTKVHYHAFIISSLDFVTSIIASIVIFS
ILGALKVKLGLDDIQDVVKQKQGLAFVVYPQAVSLMPIPQLWAVLFFFMLFTLGLDSEFA
LLETILTAIYDTFPITRRHKAKTCLIACIASFLLSIPCVSLSGQFIFDLMDTYGGGLGVL
WVAIFETIAIMWIYGVQRFSEDLQFMLNIKISILIKICWAITPLILAGIFAIACWHWTPP
TFQYQAGVLHYSDWAHGVGWFLTLIVALQIPIVALIMTIMYATRGKTKELVRPINVWGPG
DLSEIDEWHAFQYKKSFQCKQHPQGMGGPYDNYGMQYPYPYTYNYGGGNYHM
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgccatccaggaaacactcccggagtggatttgattacgccactccggccgtttattat
ccgacggctcccagttctcagtaccctccaacgggtggttatcctatctatgggtacaat
gctgccagtggatacccacactacggctatggaggtccgtacaatagcgcctatggagct
gaaggttaccatcattacatgaggtcctatgatcccaattacgacgcctacttcccagaa
ggtcccactgttgaagacaaatggaggaacacatatccgtatgtgccaacatcgtacact
cacacatcctcagagggtcgaaacacaggctcgcgtcgccgacagggaaaccaggaatcc
ggacacagcttaccccgtgaagcaggatctcggcccacaagcaatctcaaatttgccgcc
gacgagctcgaggaacagactgacgaggatcgagatcattggggatcccaatgggagttt
attttctcgtgtattggcttgtcggtggggattggaaatgtctggcggttcccgtacctg
gcctttgtcaatggaggagcggccttcctcttgccatactttatcctgctccttatcgtt
ggaaaacctatgtactttatggaggtggccttgggacagttttctcaattgggaccattt
tcggtctggcggatgaccccgatcgctcgaggggtcggtttcgccatgtgcaccctctcc
ttgatagtagccatttactacaatgtggtcatgggttattgtctccattacatgtacttc
tctttctcatggacattaccctgggacacatgtgataaagactgggctgacaaagccaca
tgttatattcccacggatgcgaattcttcatgctctgcttccaactcggaccagcgctgc
cagccagcctctgaacagtattgggagaggtttgtccttggccttcataatgctccactg
atgacatatactgaatcttataactcgacctcggacgagctcgtggatcgaacctatgcc
ttgtccgaattcgggaacatcggaatcatcaaatgggacttgttattggctttgttcatt
tcatggacagttgtatttctatgcctgtccaaaggaataaagtccagtggcaaagtcgtc
tatttcaccgccacgtttccgtacttgattctgctcatcttgctcgtccgtggactgatg
ttggagggagcattggaagggatcaaatttttctttattccggattggaagaaacttttg
gatatttcggtgtggcgattggctgctgagcaaatgttcttttcgctctccgtatcttgg
ggtggtctgatcatgttcggatcttataacaaattccgcaccaaggttcactatcacgca
ttcatcatcagttcattggattttgtgaccagcataatcgccagtatcgtcatcttctcc
atccttggggccctcaaggtcaaattgggtttggatgacattcaggatgtggtcaagcaa
aagcaagggctggcctttgttgtttacccacaagcagtgtctctcatgcctattccccaa
ctttgggctgtcttgttcttcttcatgctctttaccttgggcttggattcggaatttgcc
cttttggaaacaattctcacggccatctacgacacgttcccgataactcgtcggcataaa
gccaaaacatgtttaattgcttgtatagccagctttttgctcagtataccttgcgtatca
ttgtcgggacagtttatatttgacctaatggacacttacggcggagggttaggagtactt
tgggtagccattttcgaaaccatcgccattatgtggatctatggagtccaacgcttctct
gaggaccttcagttcatgttaaatatcaagatatcgattttgatcaagatttgctgggcc
atcaccccgttgatcctggccggaatatttgccattgcttgttggcattggacacctcca
acattccaatatcaagccggagttcttcactattcggattgggcccatggagtgggctgg
ttcctaacgttgattgtggccctgcaaattcccattgtggctctgattatgactataatg
tatgctacccgaggcaaaacgaaggaactggtgcgaccgatcaatgtttggggtcccggc
gatctgagtgaaatcgacgaatggcacgcttttcaatacaagaaatcgttccagtgcaag
caacatccgcaaggaatgggcggtccctatgacaattatggaatgcaatatccctatccg
tacacctacaattatggcggagggaactatcatatgtag
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