Tigriopus californicus (tidepool copepod): 131883142
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Entry
131883142 CDS
T09700
Name
(RefSeq) partitioning defective 6 homolog alpha-like
KO
K06093
partitioning defective protein 6
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131883142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcf03036
]
131883142
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
131883142
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PB1
PDZ_6
SL4P
Motif
Other DBs
NCBI-GeneID:
131883142
NCBI-ProteinID:
XP_059086489
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All DBs
Position
7:14827900..14829713
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AA seq
372 aa
AA seq
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MTNNRPTHVEISSNQGSMMNQGAAGRRGGSGGSGGSAAKVGGNNEGFVEVKSKFDAEFRR
FSVDKSKYQTFETFQGLLEELHLLHKSPFLISYIDPKDNDLLPINNTDNFLRALRNAKPL
LRLVIQRQGECETTLYSSRSNKGSLLNSVIGTPKQSKTTISISQPSEFRQVSAIIDVDVV
PETCRRVRLLKHGSDKPLGFYIRDGTSVRVTPAGLEKVPGIFISRLVPGGLAESTGLLAV
NDEVLEVNGIEVAGKSLDQVTDMMVANSSNLIITVKPANQRTLMPRRGSFSRTSNMSHGS
LLSKSSTQSGTGSDDHEDEDEIRDLTNANNHDHHHHHHHQNHHHSSMGPPSLDPRSSSTY
SSNHSKKQVLHL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaaccgtcccactcacgttgagattagctcaaatcagggtagcatgatgaat
cagggggcagccgggcggagagggggtagcgggggaagtggtggcagtgcggccaaggtg
ggcggaaacaacgaggggttcgtcgaagtcaaatccaagttcgatgccgagttccggcgg
ttctcggtggacaagtccaagtatcaaactttcgagacctttcaaggtctactcgaggag
ttgcaccttctccacaagtcgccgttcctgatcagttacatcgatcccaaagacaatgac
cttcttcccatcaataacacggacaatttcttacgtgccttgcgaaacgccaagccgttg
ttgcggctcgtcatccagagacaaggcgagtgtgagaccacgttgtactccagtcgatcg
aataaagggtcgttgttgaattcagtgataggtacgccaaagcagtcaaagaccaccata
tccatatcccagccttcggagttccgtcaggtgtcagcgatcatcgatgtggacgtggtc
cccgaaacctgtcgcagggtccgactgctcaaacatgggtcagacaaacccctcgggttc
tacatccgagatgggacgagtgtcagagtgacaccggcggggctggaaaaagtccctggg
atcttcatctccagactagtgcccggtgggctggccgagagcactggtctgctcgccgtc
aatgatgaggtcctcgaggtcaacgggatcgaggtggccggaaaaagtctcgatcaggtc
acggatatgatggtggccaacagttcgaacctgattatcacggtgaagcccgccaatcaa
cggaccttgatgcccagacgagggtccttctcccgtacatcgaacatgtcacatggatcg
ctcttgtccaagagctccactcagagtggcactggatctgacgatcatgaggacgaggac
gagatcagagacctaacgaacgccaataaccatgatcaccaccaccaccaccaccaccaa
aatcaccaccactcgtccatgggccctccgagcctagatcctcggagcagttccacctac
tctagcaatcacagtaaaaagcaagtcttacatctgtga
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