KEGG   Tigriopus californicus (tidepool copepod): 131883172
Entry
131883172         CDS       T09700                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like
  KO
K12842  U2-associated protein SR140
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131883172
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tcf03041]
    131883172
Spliceosome [BR:tcf03041]
 Complex A
  U2 snRNP components
   U2 related factors
    131883172
 Complex B
    131883172
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 CTK3 RRM_7
Other DBs
NCBI-GeneID: 131883172
NCBI-ProteinID: XP_059086540
LinkDB
Position
7:complement(5940953..5945159)
AA seq 978 aa
MAGSTGHSSTSSSASSSGFLKHLQESKLKSFSIGTMGKRTLSKREQDELRKKQEQDEVGK
VYKEFVSTFEDHPSSKVNKTWVKAGTFNAGNRKEDFTEKGKLYQPASRMDSGARSDLAES
SALDGRTKRPEKPGKKKEKEKKKSNLEIFKEELKAIQEEREERHRVKNMIRSGAVPPSAL
NSTGSSGSVNRELSLAESAASKDGLPGSHDTGDPNTTNLYLGNLSPRLTEQQMMELFGKY
GPLASIKIMWPRTEDEKSRGRNCGFVAYMSRIDGERALTNLSGQMIDGHEMRMGWGKPVP
IPLHPIYVPPPLLKLTLPPPPSGLPFNAQPNSKKDADTWNIGKGPLPGPSSERTQESFDK
LLYRSTVKVVIPTDRTVLCLINRMVEFVIREGPMFEAMIMNRELSNPNFAFLFENKSPEH
VYYRWRLYSLMQGDSKDHWGMEPFRMFKGGSMWKPPIMNIFTAGMPDHLVEEEEEHNFVS
RDRESKSRKDSENDKSSSKSSRRGLSNSQRDRFEDMLRTLYPDRNPIAETMVWCLEHADA
WEEIVDCVSEALSALETSPAKKIARLYLISDILHNCSVKGVPNVSYYRKGFQAKLPDIFH
DLAKYQKAIDSRMKAEAFKERVTGCFRAWEDWALYPQDFLIKLQNIFLGLIGSGNTSDSD
GENGKKGSDEANSDDEDDDDVDGMPLDGAALLKSAQKGKGFKRRKDGSDDSDVDGTPIKD
GKFSSRNSGLSGTPKAGGGAAPAGFVPSKWETVHPDEVQAQAVTSKWELFDQDEELEKRK
RRGITDPDDDDDDLDGEPLGGTPLDARAIEDRRVKLREIELKVIQYQDELESGRITRKPG
WTISEQVELFRKKLRKQTLSGKVNNGSDTAGSGDDTDEQRTRTPRGNRDDTDDSLAGSHT
SRRKKKSKRSRRSSSSSRSRSRSRERGGRKRSRSRKRHRKSSSSSSEERRPMSSSSSKRD
RRSRSKSPKRHKKKSGRR
NT seq 2937 nt   +upstreamnt  +downstreamnt
atggccggatcgacgggccactcctcgacgtcgtcgtcggcctcgtcgtcggggttctta
aaacatctccaggagtccaagttaaagtcgtttagtatcggaaccatgggcaaacggact
ctctccaaacgcgagcaagatgagctccggaagaagcaggaacaagatgaagtgggcaag
gtgtataaagagttcgtgtcgacttttgaggatcatccctcaagcaaggtcaataaaact
tgggtcaaggccgggacgttcaatgccggcaatcggaaagaggactttactgaaaagggt
aaattgtatcagccggcctcacggatggattcgggggccaggtcggatctagcggaatcg
tcggccttagatggccggaccaaaagacccgaaaagcccggaaagaagaaggaaaaagag
aagaagaaaagcaatctcgagatcttcaaggaagaactcaaggccattcaagaggaacgg
gaggagcgccatcgagtcaagaatatgattcgatctggggccgtgcctccttcggccttg
aatagtacgggatcgagtgggagtgtcaatcgtgaattaagtttggccgaatcggccgcc
agtaaagatgggttgcccggttcccatgataccggcgatcccaacacgaccaatctgtat
ttgggcaatctcagtccgagactcacggaacagcaaatgatggagctctttggaaaatac
gggcctttggcctcgataaagattatgtggccccgcaccgaagacgaaaaatcgcgcggc
cgcaactgcggctttgtcgcctatatgagtcgcattgacggtgaacgagccttaaccaat
ttatcgggtcagatgatcgacgggcacgagatgcgcatgggttggggtaaacctgtgcct
attcctcttcacccaatctacgtcccgcctccgttattgaaactcaccctacctccgccc
cccagtgggttacccttcaatgctcaacccaattcgaaaaaggacgcagacacatggaat
attggtaagggcccattgcccggtccaagtagcgagcggacgcaggaatcgttcgataag
ctcttgtaccgttccacggtgaaagtggtcattcctactgatcgaactgtgctctgcctc
attaatcgcatggtcgaatttgtcattcgcgaaggtccaatgttcgaggccatgatcatg
aatcgcgagttgagcaatcccaatttcgccttcttatttgagaacaagtcgcccgaacac
gtctactatcgttggcgattgtacagtctcatgcagggcgatagcaaagaccattggggt
atggagcccttccgaatgttcaaaggagggtcaatgtggaaacctcccataatgaatatc
tttactgctggaatgccggatcacctggttgaagaggaagaggagcacaattttgtatcc
cgtgatagagaatccaagtctcgaaaagactctgaaaacgacaagagctcctcaaagtca
agtcgtcgtggtctgtccaattctcaacgcgatcggtttgaggatatgttgagaacattg
tatcccgaccgaaacccaattgccgaaaccatggtttggtgtcttgaacacgccgacgct
tgggaagagatcgtggattgtgtctcagaagcattgtcagctttagaaacctcacctgcc
aaaaagattgctcggttatacctgatctcagacatcctccacaactgtagcgtgaagggc
gtgcccaatgtgtcgtattatcggaaagggtttcaagccaagttgccggatatcttccac
gacctggccaaatatcaaaaagcaatcgattctcgcatgaaagcagaggcatttaaagaa
cgagtcacgggctgcttcagagcatgggaggactgggctctgtatccgcaggatttcctg
atcaaactgcagaacatattcttgggattgatcgggagtggcaacacctctgactctgac
ggagaaaatggtaagaaaggttccgacgaagccaatagcgatgatgaagacgatgacgac
gtggatggaatgcccctagatggggcagcccttcttaagtccgcccaaaaaggaaaagga
ttcaaacgaaggaaagacggctctgatgattcagatgtggacggcactcccatcaaggat
ggaaaattctcgtcgcgaaacagtggtctatctggcactccgaaggcgggtgggggagca
gctccagctggatttgttccttcaaagtgggaaaccgtacatcctgatgaagtccaagct
caagcggtcacatcaaaatgggaactatttgatcaggatgaggaactcgaaaagcgaaaa
aggcgcggaatcacagacccggacgacgatgacgacgatttagatggtgagcccttggga
ggaacgcccctggatgcgcgagctatcgaagacagacgcgtcaagctacgggaaatcgag
ctcaaagttattcaataccaagatgagctggaatcggggcgcatcactcgaaaaccaggc
tggactatctcggagcaggtggagctgtttcggaaaaagcttcggaaacagacattgtct
gggaaagtgaataacgggagcgatactgctggatcgggagatgacaccgacgaacaaagg
actcgaactccccgtggaaatcgcgatgacacggatgattccctggcaggcagccacacc
tctaggagaaaaaagaaaagcaaacgatcgcgcagaagctcaagctcttcgcgatctcgc
tctcgctctcgagaaagaggtggtcgaaaacgtagccgatcacgaaaacgccataggaaa
agctcgagctcaagttcagaagaacgacgaccaatgtcatcctcatcctccaagcgcgat
cggagatcgaggtcaaaatcccccaaacgacacaaaaagaagagtggtcgtcggtag

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