Tigriopus californicus (tidepool copepod): 131883174
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Entry
131883174 CDS
T09700
Name
(RefSeq) uncharacterized protein LOC131883174
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131883174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131883174
03009 Ribosome biogenesis [BR:
tcf03009
]
131883174
Enzymes [BR:
tcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131883174
Spliceosome [BR:
tcf03041
]
Complex A
U1 snRNP components
U1 related factors
131883174
Complex B
131883174
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
Pre-60S particles
Helicases
131883174
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
131883174
NCBI-ProteinID:
XP_059086542
LinkDB
All DBs
Position
7:complement(3911324..3914935)
Genome browser
AA seq
546 aa
AA seq
DB search
MNRYGGGSSYGGSRGSSYGGGGGGGGSRFGSDRGGSSRFGGGDRYGGGGDRYGGRGGGGM
KGKQPGEGLRKVRWDEYSLVPFEKHFYNPHPNLVNADPAAVNAYRKEREISIIKGSNIPN
PIMNFHEGGFPDYVMKEVERQGFTTPTAIQSQGWPIAISGLNMVGIAMTGSGKTLGYLLP
GIIHVNNQPYLERGDGPIVLVLAPTRELAQQIQEVATEFGRSSKIRNTCVFGGAPKGPQL
RDLENGCEIVIATPGRLIDFLEMGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIIEQIRP
DRQVLMWSATWPKEVQRLAEDFLQDYVQINIGALTLHANHNILQIVDVCDEFQKEQKLAR
LLEEIGCEPHNKILIFVETKRKADELTRLMRKDGYPAMCIHGDKQQKERDWVLGEFKHGA
TTILVATDVAARGLDVDDVKFVINYDYPNNSEDYIHRIGRTGRKDRTGTAYTLFTPGNSA
KANDLVSVLQEAKQVVNPKLQELAHSSYGRRSGGSSRYGGGGRGYGGGYGGGRGGGGRGG
GGGRRW
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgttacggtggaggaagtagttatggtggaagtcgtggtagcagctatggtggt
ggcggcggcggaggaggaagccgctttggtagcgaccgtggaggcagcagtcgtttcggt
ggaggtgatcgttatggaggtggaggtgaccgatacggaggccgtggaggtggtggcatg
aagggcaagcaacccggtgaaggtctccgcaaggtccgatgggacgaatacagtctggtg
cccttcgagaagcacttctacaatccccatcctaacttagtcaatgctgatccggccgcc
gtgaacgcttatcgcaaggaaagagagatctcgatcatcaaaggatctaacattcccaat
cccatcatgaactttcacgagggtggcttcccggactacgtgatgaaggaggttgagaga
caaggcttcacaaccccaactgccattcaatctcaaggctggcccatcgctatttctggg
ctcaacatggtgggcatcgccatgacaggttcgggcaaaaccttaggttaccttctcccc
ggtattattcatgtcaacaatcaaccctacttggaacgtggggatggacccattgttctg
gtcttggcacccactcgcgagttggcccaacagattcaagaagtggccaccgagttcggc
cgctcatccaagatccgaaacacgtgcgtgttcgggggagcacccaagggaccccagctc
cgtgatttggagaacggatgtgaaatcgtcattgccacccctggtcgattgatcgatttc
ctcgagatggggaagaccaacttgagacgcaccacttacttggtcttggacgaagccgac
cgcatgttggacatgggcttcgagccccaaatccgcaagatcatcgagcagatccgcccg
gaccgtcaagtacttatgtggagtgccacctggcctaaagaagtccaacgcttggcggaa
gatttcctccaggattacgttcaaatcaacatcggagctctcaccctccacgccaatcac
aacattcttcagatcgtggacgtgtgtgacgagttccagaaagagcagaaactggctcga
cttttagaagaaattggatgcgaacctcataacaagatattgatcttcgtggaaaccaag
aggaaggccgatgagctgacccgactcatgcggaaggacggctacccagccatgtgcatt
cacggcgacaaacaacagaaggagcgcgattgggtcttgggcgagttcaagcacggtgcc
actaccattctcgtggccacggatgtggctgctcgtggattggacgtggatgatgtcaag
tttgttatcaattatgactacccgaataactctgaggactacattcatcgaattggccga
accggtcgcaaggaccgcacaggaaccgcctacaccctattcaccccaggaaactctgcc
aaagccaacgatctcgtgtcagtgttacaagaggctaaacaagtagtcaatcccaagcta
caggagcttgcccacagcagctacggacgccgatcgggtggaagtagtcgctatggcggt
ggtgggcgtggttatgggggtggatacggcgggggtcgtggtgggggtggtcgaggaggc
ggtggaggacgtcgttggtaa
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