Tigriopus californicus (tidepool copepod): 131883239
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Entry
131883239 CDS
T09700
Name
(RefSeq) homeobox protein Nkx-2.4-like isoform X1
KO
K09342
homeobox protein Nkx-2.1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131883239
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
131883239
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7373
Motif
Other DBs
NCBI-GeneID:
131883239
NCBI-ProteinID:
XP_059086647
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Position
7:complement(9274131..9282049)
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AA seq
398 aa
AA seq
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MSMKQFSVSNILNEEIATVPPNYKSDGYAPFQSSEYFEKPYSRGQGIPFGSGDRSKLSLD
SIQTNRPQENIHYTSSVLPTSTMSSLSQNNTHSVNYMQTAMSQFNSAAAAAAAVAAFPGA
GSYCPQGSSVGSSTHSVDLGGYHDIRSSANPQHHPGWYSNSTNGDPRFASEYFSSLMRGS
AAAAAISGPNPNHIPSSGSLHSCSSDKSTLQFPLAQRRKRRVLFTQAQVYELERRFKQQK
YLSAPEREHLASLIHLTPTQVKIWFQNHRYKYKRQAKEKAMSEQSTDSNVDEPHFFQSSP
RRVAVPVLVKDGKPCSTPNGDILNSLDLNMSSTNAKSEYILPSNASSVDIGVSGISASAS
SQLPTLVQMSYHHSNHSRDLLADNVSGNQYTCLQNRAW
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaaacagttttcggtatctaatattctaaacgaagagattgccactgttcca
cccaattataagtcagacggatatgctccattccaatcctcggaatattttgagaaacct
tactcaagaggtcaaggcattccctttggtagcggtgatcgatcgaaattgtccttagat
tccattcaaaccaatcgaccccaggaaaatatccattacaccagtagtgtcctgcccacc
tccaccatgagttctttgtctcaaaataacactcactcggtcaattatatgcagactgcc
atgtcacagttcaactccgcagcggccgccgcggctgccgtggcagcctttccaggtgcg
ggtagctattgtcctcaagggtcctcagtcggaagtagcactcactcagtggacctcgga
ggatatcatgatattcgatcttcagccaaccctcaacaccatccaggatggtactcaaac
tccaccaacggggatcccagatttgcctcagaatatttttctagtctaatgcgaggaagc
gctgctgccgccgccatatcagggccaaatcccaatcacatcccttcaagtgggtctctt
cattcttgttcgagcgacaaatctactttgcaatttcctctagcacaacgaagaaaacga
agagtgctcttcacacaggctcaggtttatgaattagagcgtcggttcaaacaacagaag
tacttatctgcaccagagagagaacacttagccagtctaatacatttaacacctacccag
gtcaaaatttggtttcaaaatcaccgatataagtataaaaggcaagcgaaagagaaagcc
atgtccgagcagtccactgattcaaacgtggatgaacctcattttttccagagctctcca
cgacgagtggctgtcccagttttagtcaaagatggaaaaccttgtagtacgcccaatggg
gacatactgaattccctggacctaaatatgagcagtacgaacgccaaatctgaatacatt
ctcccgtccaatgcatcatctgtagatattggtgtatctggtattagtgcaagcgcatct
tctcagctgcctactcttgtgcaaatgagttatcatcactctaaccattcccgagatctt
ttggcggataatgtgagcgggaatcaatatacatgtcttcaaaacagagcttggtga
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