Tigriopus californicus (tidepool copepod): 131883324
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Entry
131883324 CDS
T09700
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131883324
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
131883324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
131883324
NCBI-ProteinID:
XP_059086759
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All DBs
Position
7:14638565..14652759
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AA seq
1406 aa
AA seq
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MSTSNPGSINSGGAHTAATGSSSVPGSGGTSVSVQVNHFLSDLIKVESVEQAFNHFLLHR
PDLERAQQEATLQEWITLLRDVAQIPATPTASGEVSLAPAQQQDEALRTFVASMAGQKNR
KTLTLLKELLVGAVGVNAVSARQVCDAVLGSEQLRYEHESFWTVSFALVRRIVGGVDYKG
VREIMKKCIEKVLSLPSDIDPSASPQLASIKNLLAYIFDRNAALLPGYFIVNEILKSYPE
QRNWPHWALVAMIGEFLNSFRPTAQMVTSINRHRMRPIVENTGKAHLVSTWKLDPNSVKF
ILKGSTTYDRILPYTKTIVEPQRQLLQYILGQPYSKEMVNNIFGLQKPRKDGNAAGGSQR
LHTLEDELVHMFVNTMKLAEVTDSEDNQVLWRTLSSELIFFILFQYITFPTFVESLANQL
QELNLKEGRDDLMWSLLQFISGSIAKNTTSEFVPVLRLLSLYDENEPLPVPDTTMPCCIR
KFAATAVYIHLCNKAKSDLTHLQFNLPVALQRHYEFLQQLSTRELKMPESLQSDYLIPVL
CNTFSTAQDVFQQPMAALVKAIGGTLDPAEKMAMPGRNCLANGATEPLSMDILDALSVHS
KMSLIHSIVTFIGKQISTKTTLALAPALVETYCRLLVYSEIESLGVKGFINQLFPQAFKQ
NAWGILHMLLEIFSFRFHHIQAHFRLQLLNHLQIGFINAVHPVLNKNAQLHAMGEAATLR
LITGLGNSEICPPKNQPTGTGPNAQGAKQTTVLYGDSEELNCVVVLALARSIHVNGLEQQ
SSQWVKEVLTNIMQKTPHSWPSHTLQNFPPILQEFFKENSGSKENKPQLKQKVEEEYKIW
ASMSNEHDILQHFATINNSLFLCVLWKMLLETDQISPVAYKVLERINAKQFTAHLRSFCD
LLVCEFSKSGGSGHVNKCIEAMNNLIWKFNIITLDRLILCMALRTNEGNEAQVCFFIIQL
LLLKPIEFRSRVSEFVRTMSPEHQLIKDFHKTHLEFHTKYPERFHADEHLAVDGQIQGGG
PTLPTYFGNVCLRFIPVFDIVVHRFLELPPVTKNLETLIDHVGVLYKFHDKPITYLYNTL
HYYERKVRERPSLKRKLIFSITGALKDVRPTGWCLTNDYMDYLNSDGKDWQPPRDYYLRL
VGRLTHTIQGKHPFPTLDWRFNEFPNEGAHALYCTCVEIMGIPGEPTQVGASLMDVVLES
SHAIPPGELPDWINSIGVILSNLPEAFWNGLYQRLVGAITSAPLTQWNLPQNPFQVFDYD
DANGPTRLNLLLALAHSVFHHAGFNHIQTLPELVKEHFFAHIKTEEQMLFVFHVVGPFLQ
RLHSEQRFMRPLLDLTVQFYRILQQVDKECKHLKYIDSVCDILYHIKYQFTGDSVKGDVE
RVVRELSGPLQLRLRFIAPGILQPNA
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctccaatccgggctccattaatagcggtggagcgcacacggcggccacgggc
tcgtcgtcggtgcccgggtccggcggcacgtcggtctcggtccaagtgaaccacttcttg
tccgacctgatcaaggtggagtcggtggagcaagccttcaaccactttttgctccatcgt
ccggatttggaacgagcccaacaagaggccaccctgcaggaatggatcacgctcctgcgc
gacgtggctcagatcccggccacgcccaccgcctcaggtgaggtcagtctggccccggcc
cagcagcaagacgaagccttgcgcacgttcgtggcctccatggctggtcagaagaaccgc
aagacgctgaccctgctcaaagagttgttggtgggcgcggtgggcgtgaatgcggtcagt
gcccgtcaagtgtgcgatgcggttttgggcagcgaacaacttcgctatgagcatgagtcg
ttctggacggtgagctttgccttggtgcggcgtattgtgggcggggtggactacaagggc
gtgcgcgagatcatgaagaagtgcatcgagaaggtcttgtccttgcccagtgacattgat
ccgtcggcctcgccccaattggcctcgatcaagaacttgttggcctacatttttgatcgg
aatgcggccctgttgcccggatattttatcgtcaacgagatcttgaagagctatcccgag
caacgcaattggccgcattgggctttagtggccatgatcggcgagttcctcaacagcttc
cgacccacggcccaaatggtcacctcgattaaccgccaccgtatgcgacctatagtggaa
aacacgggcaaggcccatttggtgtccacttggaaactggatcccaattcggtcaaattt
atcctcaaaggctccaccacgtatgaccgcattttgccctacaccaagaccatcgttgag
ccgcaacggcagttattgcagtacatcttaggtcaaccgtactccaaggaaatggtcaac
aacatttttggactgcaaaaaccgcgcaaagatggcaatgcagccggtggatctcagcgt
ttgcacactctggaggatgagctggttcacatgtttgtgaacaccatgaagttggccgaa
gtcacggactcggaagacaaccaagtgctgtggcgaactctgtcgtcagagctgatcttc
ttcattctcttccaatacatcacctttcccacgtttgtcgagagtctcgccaatcaatta
caagagctcaatctgaaagaaggccgggatgacttgatgtggtcccttcttcaattcatc
tccggttccatcgccaagaacacgaccagtgaattcgtgcccgtactgcgactcttgagt
ctgtacgacgaaaatgagcccttgcccgtgccggataccacgatgccgtgttgtatccgc
aaatttgccgccacggccgtgtacattcacttgtgcaacaaagccaaatctgacctgacc
catttgcaattcaatctgcccgtggcccttcagagacactacgagttcttgcagcaactc
tcgacccgtgagctgaaaatgccggaatcgctgcagagcgactatctcattcccgtgttg
tgcaacacgttctccacggctcaagatgtgtttcaacagcccatggcggccttggtcaag
gccattgggggcacattggatccggccgagaagatggccatgcctgggcggaattgtttg
gccaacggagccaccgagcccttgagtatggacatcttggacgcgttgtcggttcactcg
aaaatgtcgctcatccacagcattgtgacctttattggcaagcagatctcgaccaagacg
actttggccttggctccggctttggttgagacctattgtcgtttgttggtgtattccgag
atcgaatccttgggggtcaaaggcttcatcaatcaattgttccctcaagccttcaaacag
aatgcctggggcattcttcacatgctcttggagatcttcagctttcgcttccatcatatt
caggctcatttccgcctccagctcttgaatcatctccagattggttttatcaatgcagta
catccagtgttgaataagaacgcccaactgcatgctatgggggaggcggctaccctacgg
ctcataacaggcttgggcaactcagaaatttgtcctcccaaaaatcaacccacgggtacc
ggacccaatgcgcagggtgccaaacaaaccacggtcctttacggagactccgaggaattg
aattgtgtagtggtactggccttggcccgatcaatccatgttaatggattggaacagcaa
tcctcacagtgggttaaggaagtgctgacaaatatcatgcaaaagactccgcatagctgg
ccctcgcataccttgcaaaactttccaccaattctccaagagttcttcaaggaaaattcc
ggatcgaaagagaacaagccgcaattgaagcagaaagtcgaggaagagtacaagatctgg
gcttccatgtccaatgagcatgatatcctgcagcatttcgccaccatcaataactcgtta
ttcctttgcgtgctctggaagatgcttttggaaacggatcaaatatcccccgtggcttat
aaggtcttggaacgaatcaacgccaagcagttcacggcccatttgcggtcgttctgcgat
ctgctcgtgtgcgagttcagtaagtcgggagggtctggacatgtcaataaatgcatcgag
gccatgaataatctcatatggaaattcaatatcatcaccctcgaccgactcattctctgc
atggccctccgaaccaacgagggcaacgaggctcaggtgtgctttttcatcattcaactg
ttacttctgaaacccatcgagtttcggagccgcgtatcagaatttgttcgcaccatgtct
cccgagcatcagctcatcaaggactttcacaaaacgcatctcgagttccacacgaaatac
cccgagcgattccacgccgatgagcatctcgcagtggacggccaaatccaagggggcggc
cccaccctgccaacctactttggcaacgtctgtcttcgattcataccggtctttgacatc
gtggttcacagatttttggaacttcccccggttaccaagaacctcgaaacgttgatagac
catgtgggtgtgttgtacaaatttcacgacaagcccatcacctacttgtacaacacgcta
cattattacgaacggaaagttcgagagcgcccgtcgttgaagcggaagcttatttttagc
atcaccggggctttgaaggatgttcgtcctacgggctggtgcctcaccaatgattacatg
gactacttgaactcggatggaaaggattggcaaccaccccgagattactacctacgcttg
gtgggccgattaacgcacacaatccagggaaaacatccttttcccactttggattggcga
ttcaacgagttccccaacgaaggagcgcatgccctctattgtacttgtgtggagatcatg
ggaatcccaggagagccaactcaggttggggccagccttatggacgtggtcctggaatcc
agccacgccattccccccggagagctcccggattggatcaactcgatcggtgtgatcctc
tccaatctccccgaggctttctggaatggcctctaccagcgcctggtgggtgctattacg
agtgcccctctgacccaatggaacttgccgcagaacccgttccaggtgtttgactacgac
gatgccaatggtcccacccgattgaaccttctcctggctttagcccactcggtatttcat
catgccggattcaaccatatccagactttgcccgaattggtcaaggagcacttcttcgct
cacatcaagaccgaggaacagatgctgttcgtgttccacgtggttggaccattcctgcag
cgactccatagcgaacagcgcttcatgcgccctctcttggacttgactgtgcagttctac
cgtatcttgcaacaagtcgacaaggagtgcaagcacttgaagtacatcgattccgtgtgc
gacatcctctaccacatcaagtatcagttcacgggcgattccgtgaagggcgatgtggaa
cgcgtagtccgtgaacttagtggtccattgcaacttcgccttcgattcattgcccctggg
attctccaaccgaatgcttaa
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