Tigriopus californicus (tidepool copepod): 131883346
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Entry
131883346 CDS
T09700
Name
(RefSeq) DENN domain-containing protein Crag-like
KO
K20163
DENN domain-containing protein 4
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131883346
Membrane trafficking [BR:
tcf04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
131883346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
Motif
Other DBs
NCBI-GeneID:
131883346
NCBI-ProteinID:
XP_059086817
LinkDB
All DBs
Position
1:complement(13397919..13406909)
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AA seq
1801 aa
AA seq
DB search
MEEVPRVADYLVIAGLPRDDQPLQLLDDCSLEVNLKQSAHQDPITDITVIIPSLGETTPD
EFQLVEATPSGLKANLNFGSFRSPEVLLCYRRGRDREPLLDLGVLYEDTDRLMPDSQLVE
FTPTPHSANVNNALKPATFLTYRRSPEKFPCNQLVVMDVCVIVTSKGETPPHSFVKINKS
LNRGLVGSDVYLCLKKSMNRPNLISYKPDLLSRFPLKNNVAYNVEDSVAFFCLPMGANLE
CWPQNLHSSSVCSSFVLTLHDRSRVYGSAITFYEKFDEQKRPLSDEQQKALFPKTDRTPP
GCKIVSNKCVCLLSRWPFFDAFEKFLFFLYKTQVFGSKDVPLERFISHFLYDVPFPSPSR
PRILIQLSALDQIALFQPEELPLPRSGASFRNFLQTLGVDNCLLVLLLALTEQKILIHSH
RPDVLTSVAEAVIQIIFPFYWQCPYIPLCPIGMSDYLSAPLPFVMGFDSGFFDLYDQPSD
VNAVDLDSKMVTVCQEKQGLTIKTLPKKASRQLRNRLEKLEMECQQQDDSSLQMEATRDE
SVDSEFRFKKRAMKLDMKIREAFLHFMVSVLSGYRHFLLPITSAPKVGATDADNLFDQKG
FLRSRDRNFQRFYTMLTKTQMFTKFIEERSFVSETNTCLAFFDECMERTESGGVPDFLEY
EDLESDRTLFILPPDCSKDFPENTEFKYDTFTLNPDLFPERDLSDPDGEIDEAFKGSQTP
ASASMAKRTRQEIRSAQKMQKIARDNDRNPFLWSKCLINTSYSLWFIHLPSYMLANKAQP
LTLRSGLTLLQRMKRLRLHPADEICYRVMMQLCHEYDQPILAVKVLFEMKAIHLHPNAVT
YGYYNRAVLESKWPEGEASRGVILWGKLRNLIMAITILKVVAKEGNFLPQSRLKSVSSTK
VNSQVGQKAQGLDEQDNVSQCSSELSQDSGIKTLDRNLGIEPMTEVPEHVNDGNESNQDD
LDEDKEIEIVIKGRENGQEGAELEDDDEEDFRKRLSSIVRSPGNPDKEEDESAEKTSGLQ
TSTPDDENDSTPNQANTEEEAGQVSQRLSFPEENIALGVTSINSPHETPSKPETKRVLGH
NLPVEKPKLLEQNRTTRKNVTSYTNIRGKHANLFQQNQTKSLDLPDTPSSGGSEGGSKRV
NRSLFKSESGHQNELGLSVDMAKLDEMMDSNSMPKPLIRNPSSGSLRSKLVPSPVTESDP
LGAISGQVSPCPPEDPMESKTNSLPHSASQSVEAHLNTKPRDNILGSPFAEDRLARSATL
PLDQTDSSSSSSLTPSFSSFRNLTKSGGLMTNRLNSLKKGGSYFSSYLSPGTATQKKAQD
ALNQSFVSVKSVYNNVSKRVEEIRESVTNTPGSPAGTAGLSPASSYQYLATPERKRDEDA
GSTCSTDSRRPSTVDQNQIPMNDQSETWSSLTGQLWEQFWGTDHHSGAPRPKLKASDITE
PFENLYMIMPKQLACPMAMEVQMTSCSECTSCRGVLYDEEIMSGWTAEDSNLTTQCAFCK
QMFVPWLYTQIVDYRFRPKEQSRPNSHPLENGSIAQDVTPSLTHPSPVQYLSPLVLRKRL
EHLLETEGDACLLDPKIVQTNPIIFWNLIWYFERIGVKSHLPGLCLSAAQRLAEGLEGVI
DDSWAGADHKNVQILCRWDNKRFHSPTRPHLYTLWQVKDAEGDKMGPIRQIKVEDQHPSY
KGIMDHVIHGVQENDLLQPLKTMLERRKNDSAKICPSTPTKGSPPATPSIPNTPRSVYRE
IMYLILVSLGQDNIDLTAFDREYLRAYRKLSPKYKEMAKTYDEPPSMQTQFCRKLFRELK
L
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggtgccgcgagtggcggattacttggtcatcgctgggctaccccgagatgac
cagccactccaactactcgacgattgttcgctcgaagtcaatctcaagcagagcgctcac
caggatcccatcaccgatatcacggtgatcatcccgagcttaggcgagaccacacccgat
gagttccagttggtagaggccacgcccagtgggttgaaggctaacctgaattttggatcc
tttcgctcgcccgaggtccttttgtgttatcgtcgaggtcgcgatcgagagcccttactg
gatctgggtgtgctatatgaagacactgatcggctcatgccggattcgcaattggtcgaa
tttactcccactccacattccgcgaacgtgaacaatgccttgaaaccggccacttttctg
acctatcgacgatcccccgagaagtttccatgcaatcaattggtggtcatggatgtgtgt
gtgatcgtgacatcgaaaggcgagacgccaccgcactctttcgtgaagattaacaagtcc
ttgaaccggggtctggttggatcggatgtgtacttgtgtttaaaaaaatccatgaaccgc
ccaaatctgatctcttacaaaccggacctgctctcgagattcccgctgaaaaacaatgtg
gcctacaacgtcgaggactctgtggccttcttctgtttgcccatgggcgctaatttggag
tgctggccccagaacttgcactcctcgagtgtgtgctcctctttcgtgctcactctccac
gaccgaagtcgagtgtacggatcggccatcaccttctatgagaaattcgatgagcagaag
cgcccgttgtctgatgagcaacagaaagctttgtttccgaagacggataggacgcccccc
ggctgcaagatcgtctcgaacaagtgtgtgtgtctgttgtcccgatggcctttctttgat
gccttcgagaagttcttgttctttttgtacaaaacccaggtttttggatccaaggacgtc
ccattggagcggttcatctctcacttcttgtatgacgtgccttttccgtcaccctcccga
cccaggatactaatccaactctcggcactcgatcaaatcgcattattccaacccgaagag
ctgcctttgccacgaagtggagcctcgtttcggaacttcctgcagaccctgggggtggac
aattgtttattggtgttgcttctggctctgactgagcaaaaaatcttgatccatagtcat
cgcccggatgtgctgacctcggtggccgaggccgtcattcaaatcatattcccgttctat
tggcagtgtccctacattcccttgtgccccattggcatgtcagactacctctcggcgcca
ttaccctttgtgatggggttcgattccggattcttcgatttgtacgaccaaccctcggat
gtgaatgccgtggatcttgactcaaagatggtgacagtgtgccaagaaaaacagggtctc
accatcaagaccttgcccaagaaggcctctcggcaattgcgaaatcgtttggaaaagttg
gaaatggagtgccaacaacaagacgacagttccttgcagatggaggccactcgagacgaa
tcggtggactctgagtttaggttcaaaaaacgagctatgaaattggacatgaagatccgc
gaggcctttctccactttatggtgtctgtcttgagcgggtatcgccatttcctcctaccc
atcaccagtgcacccaaagtgggcgccacggatgcagataatctgttcgatcaaaagggc
tttctccgatcaagggaccggaactttcaaaggttttacaccatgctcaccaagacccag
atgttcaccaagttcatcgaggaacgatccttcgtgtccgagacgaacacgtgtctggcc
ttcttcgacgaatgcatggagagaacggaaagtgggggcgttcccgactttctggaatat
gaggatttggagagtgatcgaactttgttcatcctccccccggattgttccaaggacttt
ccggagaacaccgaattcaaatacgacacgttcacgctgaacccggatctctttccggaa
agggatctctctgatcccgatggggaaatagatgaagctttcaagggttctcaaactccg
gcgagtgcaagtatggccaagcgaacccgccaagagatccgatcagcccaaaagatgcag
aagatagcacgagacaacgatagaaatcctttcttgtggtccaagtgtctaatcaacacc
agttactcgctctggtttatccacttgcctagttacatgctggccaacaaggcccaacct
ttgactctacgcagtggactgaccttgttgcaacgtatgaaacgcctacgtcttcatccc
gccgatgagatatgttaccgagtgatgatgcaattgtgccatgagtacgaccaacccatc
ttggccgtgaaagtgctctttgaaatgaaggccatccaccttcatcccaatgccgtgacc
tacggttactacaatcgggctgttctggagtcaaaatggccggagggtgaggctagtcgt
ggggtcattctgtgggggaaactgcggaatcttatcatggccatcaccattctgaaagtg
gtggccaaagagggcaatttcctaccccagtccaggctcaaatcagtgtcctcgaccaag
gtgaattcccaagttggacagaaagctcaaggactcgatgagcaggataatgtgtcccaa
tgctcttcggagctttctcaagactccgggatcaaaaccctggatcgcaacttgggcatt
gaacccatgaccgaggttccagagcatgtcaatgatgggaatgaatcgaatcaagatgac
ttggatgaagacaaggagattgagatcgtgatcaaaggccgtgagaatggtcaagaagga
gctgagctcgaggacgatgacgaagaggacttccggaagagattgagtagtattgttcga
tcacccggtaaccctgataaagaggaggatgaaagcgctgaaaagacctctggccttcaa
acctcgactccggacgatgaaaatgattccacacccaaccaggccaacacggaagaagag
gcaggtcaagtgagccaacggctatcctttcccgaggaaaacattgccttgggagtgacg
agtatcaacagtcctcatgaaacgccctcaaaaccggaaacgaagcgtgtgctaggtcac
aatttgcccgtggaaaagcccaagttgctggaacaaaatcgaacgacacgcaagaatgta
acgagctacacgaatatccgaggaaagcatgccaatctgttccaacaaaatcaaaccaag
agtctcgatttgcctgacacaccttcgagcggtgggagtgaggggggctctaagcgggtc
aatcgatccctgttcaagagcgaaagtggccatcaaaatgagctaggattgagtgtggac
atggctaaactggatgaaatgatggactcgaatagcatgcccaagcctctgatacggaac
cccagctcagggagtcttcgctcgaaactcgtgccctcgcctgtgacggaaagtgatcct
ttgggtgcgatatcgggtcaagtctccccttgtccgccagaggacccaatggaatctaaa
accaattccttacctcactcggcgagccaatcggtcgaggcccatctcaacacaaaaccc
agagataacattctaggttccccttttgccgaggatcgattggcacgctcagccaccctc
cccctcgatcagactgattcgagctccagctcctcactaaccccgtcattctcgtccttc
cgtaatctcaccaaaagcggtggattgatgactaaccggttgaactcgctcaagaagggt
ggatcttatttttcttcatacctcagcccgggcacggccacccagaagaaagctcaagac
gctttaaaccaaagcttcgtgagtgtcaagtccgtctacaacaacgtctctaaacgggtc
gaggagattcgcgaatccgtcaccaacacccctgggagtcccgcaggaaccgcgggtttg
agcccggcctcgtcctatcaatacctagccactcctgaacggaaacgggacgaggacgct
ggaagcacgtgttcgacggactctcgacgaccttcaaccgtggaccaaaaccagattcca
atgaatgaccaatccgagacgtggagctccctcacaggccaactttgggaacaattctgg
ggcacggatcaccattcgggagctcctcgtccaaagctcaaggcatcggatatcacggaa
ccgtttgagaatctgtacatgatcatgcccaaacagttggcctgtccaatggccatggag
gtccagatgacctcttgttcggagtgcacttcatgtcggggggttttatacgacgaggag
atcatgtctggttggacagccgaggactcgaatctcaccacccaatgtgccttttgtaaa
cagatgttcgtcccatggttgtacacccagattgtggactatcgatttcgacccaaggag
caatctcggcccaactcccaccctcttgaaaatggatccattgcccaagatgtcacgccc
tcgttgacccatccgagtccggtgcagtatttatcgccgttggtgcttcgcaagagactc
gagcacctcctggaaaccgaaggtgacgcttgcctccttgatcccaagatagtccaaacc
aatcctatcattttctggaatctaatctggtactttgagcgcattggcgtcaagtcacac
ttaccgggactttgtcttagtgccgcccaaagactcgctgaaggtctcgagggcgtgatt
gacgactcttgggcgggtgctgatcataagaatgttcagatcttgtgtcggtgggacaac
aaacggttccactctccgacccgtccccatttgtacacgctgtggcaagtgaaagacgct
gaaggggacaaaatgggaccaattcggcagatcaaagtcgaagaccagcatccctcatac
aaaggaatcatggatcacgtgatccacggggtccaagaaaacgatcttctccagcctcta
aaaaccatgctggaacggcggaaaaatgacagcgccaagatctgcccatcaaccccgacc
aaaggatcacctccagcaacgccttcaattcccaacacgcctcgctctgtttaccgagag
atcatgtatctaatccttgtgtccttgggacaagacaacattgatctcacggcctttgac
cgcgaatatctacgggcctataggaaattgtctcctaaatacaaagagatggctaagact
tacgacgaacctccgagtatgcagacacagttttgccgcaaactcttccgagaactcaag
ctttga
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