Tigriopus californicus (tidepool copepod): 131883357
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Entry
131883357 CDS
T09700
Name
(RefSeq) uncharacterized protein LOC131883357
KO
K16330
pseudouridylate synthase / pseudouridine kinase [EC:
4.2.1.70
2.7.1.83
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00240
Pyrimidine metabolism
tcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
131883357
Enzymes [BR:
tcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.83 pseudouridine kinase
131883357
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
131883357
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
PfkB
Motif
Other DBs
NCBI-GeneID:
131883357
NCBI-ProteinID:
XP_059086795
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All DBs
Position
7:4615617..4618398
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AA seq
690 aa
AA seq
DB search
MYPRLLGREFLRFSPEVQRILHQCQSPWDLLASQIVLLESAILTHGMPYPTNLEMAHQVQ
NIIRDRGAVPATVGIISGKLHIGLTDHDLAWLARPDTAKVKVSRRDLPAVLARGGHGGTT
VAGTLLAARQTPWGSLPLFVTGGIGGVHRAGQNSMDVSADLVEMGRSSTTVISAGIKSIL
DIGRTLEYLETQGVCVGTLGETDDFPAFFTRKSGFRSPVHVRDERDMARLMATHHSLNLD
SGILMSVPIPAADEATDVEEAIQQALALADEKGITGREVTPFVLGKVNELSQGASLKANL
ALIKNNARVGADIAVELAQLVRSSIQPKSHHLQLDRDKASTAETIQLRPMVVGGSILDLV
THIRDPVVSMDGSTHLGTVDFGYGGVGRNLADALALFDLNPMFISAVGADDLGRNMIEHN
EKLDKSRVAILSDHRTAMYNIVLDCDGAVRLGVGDMSIHTQVSPSLIQEQLPRLEQCSML
VLDGNLPQESVNYLLQLDNASNVPVFYEPTDVRKSDKFLKSGVPSAVTYFSPNLKELFSA
TGSAYSYDDLNDCNASLYKAVDACVDMLTLLQVIIVTMGDDGVLIVRRGSAHEPLPLRND
PGSKSRSEFTISATHYPVRKICDAVSCSGAGDCLSAAFITSILNHHSQGQAVAAGIQAAA
LSLGQDMSVPTMLSRDIIDWQSEAKGRPIL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgcgattgctgggacgggagttcctgcggttttcacccgaggtccagcgcatc
ctccaccaatgtcaaagcccgtgggatctcctggcttcccagatcgtgttgctcgaatcc
gccatcctcacccatggcatgccttatcccaccaacttggaaatggcccatcaagtccaa
aatatcatccgagatcggggtgcggtacccgccacggtgggcatcatttccggtaaactt
cacattggattgaccgatcatgatctggcctggcttgcccgacctgacacggccaaggtg
aaagtgtcccgtcgagatttgccggcggtcttggcccggggaggtcatggcgggaccacc
gtggccggtactctgttggcggcacgacaaaccccgtggggttcactgcctttgtttgtc
acgggcggaatcggcggggttcatcgagcaggccagaactccatggatgtgagcgcagat
ttggtggaaatgggacgaagctccaccactgtgatttcagctgggatcaaatccatcttg
gatatcggtcgcaccctcgagtacctggaaactcaaggcgtttgtgtgggaacattgggc
gagaccgacgattttcctgccttttttacgcggaagagcggattccgctctccggttcat
gtccgggacgagcgagacatggcccgactcatggctactcatcatagtctgaacttagat
tcgggaatcctcatgagtgtgccgattcctgcagcggatgaagccacggatgtggaggag
gccatccagcaggctctggccttggccgacgaaaaaggaatcacgggtcgagaggtcacg
ccattcgttttagggaaagtaaatgaactctcgcaaggagcgtcgctcaaagccaacttg
gctttaataaaaaacaacgctcgggtgggtgccgatatcgccgtagaattagcccagctc
gtgcgtagttcaatccagccaaagtcgcatcatttacaactcgaccgcgataaggcctcg
accgccgaaacgatccagctcagaccgatggttgtgggcggatctatccttgatctggtg
acgcatatacgcgatcctgtggtgtccatggacggatctactcatcttggaacggttgat
ttcggctatggtggcgtaggccggaatctggccgatgctttggccttgtttgatcttaat
cccatgttcatctctgccgttggggcggatgatcttggccgaaatatgatagagcacaat
gagaagctggacaagagccgggtggccatattaagtgaccatcggacagccatgtataac
attgtcttagattgcgacggtgcggttcgtctgggggtcggagacatgagtattcacacc
caagtctcaccatctttaatccaagaacagttaccacggctcgaacagtgctcaatgctc
gtgttggatggaaacctccctcaagagagtgtcaattaccttcttcaacttgacaatgct
agcaatgtgcccgttttctacgaacccacggatgtccggaagtcagacaagtttcttaaa
tccggcgttccatctgctgtgacgtacttttcccccaatttgaaagagctcttttcggct
acgggaagtgcatactcctacgacgatctcaacgattgtaacgcctctctttataaggcc
gtagatgcttgtgtggatatgttgaccctactccaagtgatcatcgtgaccatgggcgac
gacggcgtactcatagttcgacgtggctcagctcacgaacctctacctttaaggaatgat
cccgggagtaagtctcgtagtgagttcaccatatcggccacgcattatccagtcagaaag
atttgcgatgccgtgtcctgttctggagcgggcgattgcctctcagccgcttttataacc
tcgatcctcaaccatcactcccaaggtcaagctgtggctgcgggcattcaagccgctgcc
cttagcttgggacaggacatgtccgtacctacaatgctctcgcgtgatattatcgattgg
cagtctgaggccaaaggccgtcctattctgtga
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