KEGG   Tigriopus californicus (tidepool copepod): 131883360
Entry
131883360         CDS       T09700                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131883360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tcf03041]
    131883360
   04121 Ubiquitin system [BR:tcf04121]
    131883360
Spliceosome [BR:tcf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    131883360
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    131883360
Ubiquitin system [BR:tcf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    131883360
SSDB
Motif
Pfam: SART-1 HIND Arg_tRNA_synt_N
Other DBs
NCBI-GeneID: 131883360
NCBI-ProteinID: XP_059086798
LinkDB
Position
7:complement(2717649..2720802)
AA seq 1015 aa
MGRGSKRPESETEEGQWEDDDPPPAEGGGRSPLARRPTSGSRSPGSSRPDNEGDVISSDE
DFPGPPARSAPRPRPRRSSRKSSDSAEDSEDSADSAHAPGWHRKRVKDKKKRKKSKKDKK
KKKKRKHAHGEAPRSHSASGQRRQRSRHSEDSSQDRVIVSSDAAEATDREGGSTPEVAER
EEEIETAVPVIATRRRATAADFFQEEEPEPRRDRSRSRPAPRRPSRSRERAHRGSRREER
AQPRSREERTREREREREPRELKAASPPPKAPAPEGGSQKILSMSVAESNALRASLGLAP
LKEKNAVDPNGTREERREHKAREEFARAQGGTLIPNSTKHEIHKAPENLSQKTHAEKLRE
RIQERKKKREMEARLLAIKKLGDSDSDEDRRGSSSNWVERQKKIQAEKAAALKRARMLEE
LEDDFGVGHLVQEAVAQDRAGAYGKKDLSGLKVEHSAENFASGRDVILTLKDSDVLDASA
EDTLVNVNIMDDERTKKKLEEVKKAKVGYNAYDQEEVDELTGELKRKNMLDKYDEEIEGE
QRTSFKIGHEGDYNEEEQIERQRQKIREKLNAAKRLESLALPELKVASDYYTSEETAQFK
KPKKKRKVKKRILRADDLLADLEADSSANKKPSKSPAPMDRSSKGALPMDLDEDVEIKFE
ADLDDVKLEDEGDMGLEAALNRARKLKQKRENTDVAEQILEEIKAEPKVKQETEEDLTGS
ELIGTFEEEEDGHQSQFGKPLIMNETVEFCRNLGARQFNDQFERGQKIKQESSVSKDLLE
FEESLTSAAGSSGIADRSSTKEPHQRGQWEEVDNNDDDSDFERDMKMDVDSHGEDDMNNA
AILEEEPDLQSGVAAAIQLANSKGYWEKEEKKATGSNLKHLMAKNYSIDDKMRMDDERGG
RRGDRYGGGGPSQPFQEKANYVPNVQLEYIDDGGRLMNQKEAFRYLSHKFHGKGSGKMKT
EKRMKKVMEQSLMMNMSSTDTPLQTVEKLKKKQKESATPYLVLSGNKINPQDLKK
NT seq 3048 nt   +upstreamnt  +downstreamnt
atgggacggggtagcaaacgacccgaatccgaaacggaagaagggcaatgggaagatgac
gacccgccgccggccgaaggggggggtcgttcgccgctggcccgccggcccacctcgggc
tcccgctcaccgggctcatcgcgtccggataatgagggggatgtgatctcctcggacgag
gatttccccggcccacccgcccgatcggcgccccgcccacgcccacggcgatcctcccgg
aaatcctcggattcggccgaggattctgaagattcggccgattcggcccacgcccctgga
tggcatcggaaacgcgtcaaggacaagaagaagcggaagaagagcaagaaagacaagaag
aagaagaagaagcgcaaacacgcccacggcgaggcaccgcggagtcattccgcctccggc
cagcgtcgccaaagatcgcgtcattccgaggattccagccaggaccgggtgattgtgtcg
tccgatgcggctgaagccacggatcgggaaggcgggtccacgcccgaggtcgccgaaaga
gaagaagagatcgagaccgccgtgcccgtgatcgccacgcgacgccgagccacggccgcg
gatttctttcaggaggaggaaccggagccgcgtcgagatcgatcgcgctcgcgacccgcc
cctcggcggcccagccgttcccgagaacgggcccatcggggctcgcggcgcgaagaacga
gctcaacctcgatcgcgggaagagcggacgcgggagcgggagcgagaacgagagccgcgg
gagctcaaagcggcgtcgcctccgcccaaggccccggcaccagagggcgggtcgcagaag
atcttgtccatgtcagtggctgaaagcaacgccctgcgcgcctccctgggattggcccct
ttgaaggagaagaacgcggtggacccgaacggcacccgtgaagagaggcgcgaacacaaa
gcccgtgaagagttcgcccgcgcgcaaggcgggacgctcatccccaattcgaccaaacac
gagatccacaaagctccggagaatttgtcccagaaaacgcatgccgagaaattgcgcgaa
cgaattcaagagcggaagaagaaacgcgagatggaagcgcggttattggccatcaagaaa
ctgggcgactcggattcggacgaggatcgtcggggttccagctccaattgggtggagcgg
cagaagaagattcaggcggaaaaggcggcagcgctaaaacgggcccggatgttggaggag
ctggaggatgattttggcgtgggccacctagtgcaagaagccgtggcgcaagatcgagcc
ggggcttatggtaagaaggatttgtcgggcttgaaggtggaacactcggccgagaatttc
gcgtcgggtcgggatgtgatcttaaccttgaaggactcggatgtgttggacgcctcggct
gaagacaccctagtcaatgtgaatattatggatgacgagcgcaccaagaagaagctggaa
gaggtcaagaaggccaaggtcggctataacgcctacgatcaggaagaagtggacgagctc
actggcgagctcaaacgcaagaatatgttggacaagtatgacgaggaaatcgaaggcgag
caacgcacttccttcaagatcggtcacgaaggcgactacaacgaggaggagcaaatcgaa
cgccaacgccagaagatccgcgagaaattgaatgcggccaaaagattggagtcgctcgcg
ttgcccgagctcaaagtggcctcggattattacacctcggaagaaacggcccaattcaag
aagcccaagaagaaacgcaaggtcaagaaacgcatccttcgagccgacgacttgttggcc
gatctcgaggcagattcgagtgccaataagaagccgtccaagagtccagccccaatggat
cgatccagtaaaggtgccctacccatggatttggacgaggatgtcgagatcaagttcgag
gcggatctcgatgacgtcaaactagaggatgagggcgatatgggtctcgaggctgccctc
aaccgtgctcgtaaactcaaacagaagcgagaaaataccgatgtagcggaacaaatcctg
gaagaaatcaaagccgaaccgaaagtgaagcaggagaccgaggaggatctcaccggatcc
gaactcatcggcaccttcgaggaggaagaagatggtcaccaaagccagtttggcaagccc
cttatcatgaatgagaccgtcgagttctgccgcaatttgggcgcccgccagttcaacgat
caattcgagcgtggccagaagatcaagcaagaatcctctgtgtccaaagatctccttgag
ttcgaggaatccctcacctccgcagcgggatccagtggcattgccgatcgatcctccacc
aaagagccgcatcaacggggtcaatgggaagaggtggacaacaacgatgacgattcggac
tttgagcgcgacatgaaaatggacgtggattcccatggggaggatgacatgaacaatgcg
gccattttggaggaggagcccgaccttcaaagcggcgtggctgccgcgatccagttagcc
aatagcaaaggctattgggagaaggaagaaaagaaagccacggggagtaacctgaagcat
ctcatggcgaagaactactcaatcgacgataagatgcgcatggacgatgagcgtggtggg
cggagaggcgatcgttatgggggaggcggtccctcgcagccatttcaagagaaggccaac
tatgtgcccaatgttcagctcgagtatatcgatgacggtgggcggctcatgaaccaaaag
gaggccttccgatacctcagccataagttccatgggaaaggctcgggcaagatgaagact
gaaaagcgaatgaagaaggtcatggagcagagtctgatgatgaatatgtccagtacggat
acgccgctgcagactgtcgaaaagctgaagaagaaacagaaggagtcggccacaccctat
ttggttctctccggtaacaagatcaaccctcaagatttaaagaagtga

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