Tigriopus californicus (tidepool copepod): 131883465
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Entry
131883465 CDS
T09700
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin A-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04120
Ubiquitin mediated proteolysis
tcf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131883465
04120 Ubiquitin mediated proteolysis
131883465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131883465
Enzymes [BR:
tcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131883465
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131883465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_16
zf-RING_11
zf-C3HC4_3
zf-RING_5
New_glue
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING_Vps41
FAR1_N
zf-RING-like
RINGv
Prok-RING_4
U-box_ZFPL1
zf-C3H2C3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
131883465
NCBI-ProteinID:
XP_059086930
LinkDB
All DBs
Position
7:complement(3699049..3703046)
Genome browser
AA seq
711 aa
AA seq
DB search
MNIGVENAAPRPAPRAGAPAPPAPGGPPSMSSSVWQRLRSVLLMLCSFGLTGLVLANAYY
QRQQFYPSVVYITKSNPSMAVIYVQSFVFVILFGKLVRKIFFGQLRAAEVERLVESFWYV
FTETGLTFTMFRDDISPNFVVFFTILVFLKIFHWLTEDRVDYMEQSPNITVLFHIRMVSL
MIILASVDIQLIAYAYTSTVSKGPSVQLVFAFEYAILLTILTTTAIKYVLHVIDLYGENP
WEDKAVFMLYTEVVIGFIKSLLYMIFVFILVRTHTFPVFAFRPMYQTLKSFKRAFNGVLL
SRRAIHVMNTCYPNATPEELANTDNVCIICREEMNTNTITKKLPCNHIFHKSCLRSWFQR
QQTCPTCRLEVLEAPGQNRTNPAGVNNNNNNNNNANSGNNNNNQGAQQQPRPGQFPMFDP
NMFMQGRLPFPMPPFPGVNNVGGQPGRPGAAAPPRPTTTQPSASATTTTGPPGAASMTPP
PFFPMPPFFGAPFGVPPPLPPVNFAGLTDDELRAMEGQERQNVEARVRCLRNIQILLDAA
VMEMQQYSSVAARLQPGVPSFPTTSTATQSSTTTTSATQSTTSTVSSSSGSVSNVTTSTS
STTYSLLGARPRVVAPNPSLEKEAEAVIAKMDAKTSHERKQEDPAIDPERVLSTLQDELL
SSPSTSSASPARNIDSRPSRNEEQDEIRRRRLALFEQQAQKENAEESKKSN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcggcgtggagaatgcggccccacgccccgcccctcgcgccggagcgcctgcc
cctcctgcgcccggtggtccgccttcgatgtcgtccagcgtgtggcaacggctccgctcg
gttttgctcatgctctgctcgttcggattgacgggcttggtgttggccaatgcttactat
cagcgacaacagttctacccctccgtggtttatatcaccaaatccaatcctagtatggcc
gtaatttatgttcaatcttttgtgtttgtcattctctttggcaaattggtccgaaaaatc
ttcttcggccaattaagagcggccgaagtagagcgtttggtggagagcttttggtacgtc
ttcactgaaacgggattgaccttcaccatgttcagagatgatatttcgcccaactttgtg
gtcttcttcaccatcctggtttttttgaagatattccattggctcaccgaagaccgagtg
gattacatggagcaatcaccgaacatcacggtacttttccatatacgcatggtctcgctg
atgatcatcttggctagtgtggacattcaactgatcgcttatgcctatacttcgacagtg
tcgaagggaccctccgtgcaattggtatttgcctttgaatatgccatcttgttaaccatt
ctcacgaccacagccatcaagtatgtacttcacgtgatcgatttatacggcgagaatccc
tgggaagacaaggccgtgttcatgttgtacaccgaagtggtgattgggttcatcaagtct
ctgttgtacatgattttcgtgttcatcctggttcgaacccacactttcccggtgtttgca
ttcaggcccatgtatcagaccttgaagtccttcaagagagccttcaacggtgttctgtta
tctcgcagagccattcatgttatgaacacatgctacccaaatgccacacccgaggagttg
gccaatacggacaatgtctgtattatttgccgtgaagagatgaataccaataccatcacg
aagaagctaccttgcaaccacattttccacaagagttgtctcaggtcctggttccagcga
caacagacatgtcctacttgtagattggaggttctcgaagcccctggacagaatcgaacc
aacccggctggcgttaacaacaacaacaataataacaacaatgctaattctggtaacaat
aacaataatcaaggcgctcagcaacaaccgcgtccgggtcagttccccatgtttgatccc
aatatgttcatgcaaggacgcctaccattcccgatgccaccattccctggagtgaacaat
gtgggtggtcaaccgggaagacctggggctgcagcccccccaagacccaccacaacccaa
ccttcggcgagtgcgactaccactactggacctccaggagcagcaagtatgactcctcct
ccattctttcccatgccaccatttttcggggctccctttggtgtacccccacctttgcca
cccgtaaacttcgctgggttgactgacgacgaactccgggccatggaagggcaggaacgc
caaaacgtggaggctagagtccgatgcttgcgaaacatccagattttgctggatgctgcc
gtcatggaaatgcaacaatattcctcggttgcggccaggcttcaaccaggggtaccctca
tttcctacgacatctaccgcaacgcaatcgtcgaccaccacgacgagtgcaacccaaagc
acaacctcgacagtctcatcaagttctgggagtgttagtaacgtgaccacttcaaccagt
tcaacgacatacagtttgctgggagctcgacccagggtggtggcgcctaatccgtctttg
gagaaggaagccgaggcagtgattgccaaaatggatgccaagacatctcatgagaggaag
caagaggatcctgctatcgatccggaacgtgtgttgtccacacttcaagacgaattgctc
tcctcgccatccacgtcatccgcgtcgccggcgagaaatatcgattccaggccttcaagg
aatgaagaacaagacgaaatacgccgacgaaggttggccttattcgagcaacaagcccag
aaagagaacgcagaggagagcaagaaatccaactga
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