Tigriopus californicus (tidepool copepod): 131883508
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Entry
131883508 CDS
T09700
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family B member 10, mitochondrial-like
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131883508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcf02000
]
131883508
Transporters [BR:
tcf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
131883508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_25
AAA_29
DEAD
nSTAND3
RsgA_GTPase
MobB
DLIC
ABC_ATPase
DO-GTPase2
cobW
AAA_21
Zeta_toxin
AAA_30
MMR_HSR1
AAA_18
AAA_14
AAA_24
SRP54
DUF3450
nSTAND1
Spore_III_AB
Septin
NACHT
DUF3987
AAA_19
DUF87
NFACT_N
AAA_28
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
131883508
NCBI-ProteinID:
XP_059086975
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All DBs
Position
7:9162489..9167495
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AA seq
678 aa
AA seq
DB search
MLMLRLPCWAKVGLFCPGRLSLHSGKGSFGVGWARSGMPTGFRSWPLRSCRSSSSTSSTS
ATGSAQAAKTARWTELRRLTQLFGPEKFRLTGALGLLLVSSGVTMLVPFALGKIIDVISN
ETAAGSTDPPGAAHPSQLQERLKSLAAGLLVVFTVGALCNFGRVYLMRISSQNVAARLRQ
DLFASIMRQETTFFDKSKTGELVNRLSSDTQLVSQTITQQVSDGTRSLVMTSAGVGMMMF
MSPELTVVGLSVVPPVALWAVWMGKRVKSASKELQQRLANLTEQAEEKISNIRTVLAFAN
QKKEIAIYNDRLEHVVDQARREAKIHAKFYGLTGFSGNLIILSVLSYGGSLVANHSLTVG
ELASFVLYAAYVGIGLNGVSNCXAEVMKGLGASQRIWNLMETSSALDVVTQQRPNLPLMS
LPSLEKAIVFSNVSFAFPTRPESLVLNELSFTIPANQTVAVVGTSGSGKTTLISLLLRLY
DPAKGQISFDDNDIKKIDVEQHRRRIGLVPQEPVLFSTSIAENILYGLDLRSDSNECQQE
KAMSLVQDAAREVNAHEFIMQFPEGYDTLVGERGIFLSGGQKQRVAIARAIIKDPDVLVL
DEATSALDAKNENIIRDTINRVQKNRTVLIIAHRLSTIRNADKIVVLRQGQVVEEGSFQE
LANLKGHFHEMVTKQSIS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgctgaggctcccatgttgggccaaggtcggcctattctgtcctgggaggttg
tcacttcactcagggaaggggtctttcggggtaggttgggcgagatcggggatgccaacc
ggattccgctcatggcccttgcgatcctgtcgatcttcctcatcgacgagctcgacctct
gctacgggctccgctcaggctgccaagacggcccgttggacagagttgcgcagattgacc
cagttatttggcccggagaaattccggcttaccggtgccttagggttgttgttggtgtcg
agtggtgtgaccatgttggtgccctttgctctgggtaaaataattgatgtgatatccaac
gagaccgccgctggctcaaccgatccgcccggtgctgcccatccaagtcaactccaggaa
cgcttgaagtccttggccgccgggctcttggtggtcttcacggtgggcgccttgtgcaac
tttggccgggtctacctgatgcgcatatctagtcagaatgtggcggcccgccttcggcag
gacttatttgcatcaattatgcgccaggagacaacgttctttgacaagagtaaaacggga
gagctggtcaatcgactctcatccgacacgcaactcgtcagtcagaccatcacgcaacaa
gtttcggatgggacgcgtagtctggtcatgacctcggcgggagtggggatgatgatgttc
atgtcgcccgagctgaccgtcgtgggtctcagcgtggttcctccggtggccttgtgggcg
gtctggatgggcaagcgcgtcaaatcagcgagtaaagaattgcaacaacgattagctaac
ttgaccgagcaagcggaggagaaaatctcaaacattcgcaccgtgttggcctttgctaat
caaaaaaaagagattgccatttacaacgacaggttggagcacgtagtggaccaagccagg
cgtgaggccaagattcatgccaaattctacggcttgactggctttagtggcaacctcatc
atcctcagtgtcttatcttatggtggctccttagtggccaaccactcgttaacggtaggg
gaattggcctcctttgttctttacgctgcctacgtgggcattgggctaaacggtgtgtcc
aattgttaagcggaggtcatgaagggcctgggtgccagtcaacgaatctggaatcttatg
gagacctcatccgcattggacgttgttacgcagcaacgtcctaatttgcctctaatgagt
ttaccctcccttgagaaagccattgtgttctccaacgtcagtttcgcttttcccactcga
cccgagagcctcgtgctcaacgagctgagcttcaccattcccgccaaccaaactgtggcc
gtggtgggcacaagtggatcaggcaagaccaccctgatttctcttttgctgagactctac
gatccggccaaggggcaaatctcctttgatgacaacgatatcaaaaaaattgatgtggaa
caacatcgtcgacgcatcggtctggtgcctcaggagcccgtgttattctccacgtccatt
gccgaaaatatcttgtatgggctggacttgaggtctgattcgaatgaatgtcaacaggag
aaggccatgtccttggtgcaagatgctgctcgagaagtgaacgctcatgaattcataatg
caattcccggagggttacgacactctcgtgggtgagcgtggaatctttctgtcaggggga
caaaaacaaagagtggccatagcgcgggccatcatcaaagatccggatgttttggtcttg
gatgaggccacgagtgctttagatgccaagaatgagaatatcatacgtgatacaatcaat
cgagtgcaaaagaaccggacagtcctaatcatcgctcatcgtttgtcgaccatcagaaac
gcagacaagattgttgttctgcgtcaaggacaagttgttgaggaaggatccttccaagag
ctggccaatttgaagggacacttccacgagatggtgaccaagcagtccattagttga
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