Tigriopus californicus (tidepool copepod): 131883509
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Entry
131883509 CDS
T09700
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tcf03037
]
131883509
Cilium and associated proteins [BR:
tcf03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
131883509
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Gene cluster
GFIT
Motif
Pfam:
IFT57
DUF1664
CENP-K
Fez1
NET2A_C
Octopine_DH
Sec10_N
Baculo_PEP_C
DUF4502
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
131883509
NCBI-ProteinID:
XP_059086976
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Position
7:complement(9157554..9161700)
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AA seq
406 aa
AA seq
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MGDEEFDEADIVDGGPGLAYMPFVVMEDLLDKLKLLDYEEEFVKELRMRPLSRHYFVLQT
NPGEQFYMFTSLAAWLIQKCGTPFDQPQEFDDPNSTISNILDVVRRNGVTIDFPPSKLKQ
GYGEQAIFILDRLSDEALRNTHFQWGKPIPPSEVADEEEDLKDEAELDLDRVEEEMAGEY
SDEEDDDEILHINDMGSALPMATSQRPNEILESNTDFDEWSLEVERVAPQLKVTVRSDNR
DWRTHLEQMHTYRRGIDDALTTTRVHLDKLHNDIGRTLEKITSREKYLNSQLEGSLQQFR
QLSDTLAATKEQYKQVSGGVTERSRTLAQIADDLEVIKAEMEERGSAMTDGTPLVNVRRA
LIRMKQEVANMNVRIGVLEHSLLQAKLRDRSNLQRDALNFAFANEV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgaagaatttgacgaagcagacatcgttgacggtgggccaggattagcctac
atgccatttgtggtcatggaggacttgttggataagcttaagctcttggactacgaagag
gagtttgtcaaggaactacgtatgagacccctgagtagacactattttgtgctccaaacc
aatcccggagagcagttctacatgttcacgtctctagctgcgtggctaatccaaaaatgt
ggcacgccattcgaccaacctcaagagttcgacgacccaaattccacgatttccaatatc
ttagatgtggttaggaggaacggagtgactatcgactttcctcccagtaaactcaaacag
ggttatggagagcaagccattttcatcttggatcgtctgtcagacgaagcactccgaaac
actcacttccaatggggaaagccgattcctccatcggaagttgccgacgaagaagaggac
ctgaaagatgaggcggaattggatctagaccgggtggaggaggaaatggctggagaatat
tccgacgaagaagacgacgacgagatattacatattaatgatatgggctcggctctaccc
atggccacatcgcaaagacctaatgagattttggaatccaatacagacttcgacgaatgg
agcctggaggttgagcgcgtggctcctcaattgaaggtcaccgtcaggtccgacaatcga
gattggcgcacgcatttggaacaaatgcacacatacagacgcgggatcgacgacgcttta
accacaactcgagttcatctcgataaactacacaacgatatcggccgaactctggaaaag
ataacatcgcgggagaaatatctcaattctcaattggagggatctcttcaacagttccgc
caattgtccgacactttggccgccaccaaagagcagtacaagcaagtcagtgggggggtc
acggagcgttctcgaaccttggctcaaatcgcagacgacttggaagtgatcaaagccgaa
atggaggaaagaggcagtgccatgactgacggaacgcccctagtcaatgttcggcgagca
ttaatacgcatgaaacaagaagttgcgaacatgaacgttcgcattggggttcttgagcac
tcgttgttgcaggccaagttgcgggaccgttccaatctacaacgggatgctcttaatttt
gcttttgccaatgaagtttag
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