Tigriopus californicus (tidepool copepod): 131883542
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Entry
131883542 CDS
T09700
Name
(RefSeq) endoplasmic reticulum membrane-associated RNA degradation protein-like
KO
K25139
endoplasmic reticulum membrane-associated RNA degradation protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
131883542
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Gene cluster
GFIT
Motif
Pfam:
DUF4209
Motif
Other DBs
NCBI-GeneID:
131883542
NCBI-ProteinID:
XP_059087013
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Position
7:6636212..6637971
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AA seq
578 aa
AA seq
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MASKPSFLSPTVKSLWDIFRGTNSAGSLPLEFSSYSDLITPDLTWPRRVNQDPDTFYSHL
ARDLRVIMHSVHEKVMATDGPSRNLPWLSHPQLFNEIVQDFRQGRYRCHATLMLMCPILE
RSLGNILFSRAPDVAIPPLLRDLVSSRRLITVIGRSNAIVLDLFFGSPHSVNLRNIIWHG
FAQDSDLPSVFVTNIYFLCASIQIRISDGGAIVPRPFIVLAPDIEFPQETPDESSDECPD
LRNAIRSHHHLLITAELLIKMEFQLRRIFCAVNKCHQRTLTAENSRVYITFKEMFSSTID
DSGTENKLLSFLGVDVLNLLMDLLILPKGPRIRDRLGHGELDLSQSENFEKWAKTVTFVK
IRIAESETDKVVECQYRPQFHPIFIVIRSIETLVPTICDLQSSMGTASKDFAQVLDLEVD
PLPDLSSWRDTILTRCQGIPFNLLDRPPPECSVISIVNRWTRALKDFTVVLAKDVHQRTR
KLHSQESSLRHLSSSRKLFSMFQVVSETVLKSIISLTFVLKDLQSLDPMALGQIQKTLKQ
TCIITEKTVALVDKSKYDELKYALTAWFNLLTDLPHSQ
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgaaaccttcatttttgtcacccacggtaaaatccttgtgggacatcttccgt
gggacgaattctgcgggatcactcccactggagttctcaagttatagcgatctcatcacg
cccgaccttacatggccccggcgtgtaaatcaagatcctgacacattctactcgcacctg
gcgcgagacttgcgcgtcattatgcattctgtgcacgaaaaagtgatggccacggatgga
ccttctcgaaatctcccatggctttcgcatccacagctctttaatgagatcgttcaggac
tttaggcaaggtagataccgctgtcatgccacgctcatgctgatgtgtcccatcttggaa
cgctccttagggaacatcttattcagtcgggcccctgatgtcgccatcccgccgcttcta
agggatctggtgagctcccgacgtcttatcactgtcattggcagaagtaatgccatagta
cttgatcttttctttggatcgcctcattcggtcaatctaaggaacatcatctggcatgga
tttgcccaagacagtgatctgccaagtgttttcgttaccaatatttatttcctgtgcgcg
agcattcaaattcggatcagtgacggcggagccattgttccaagaccattcatagtttta
gcccccgatattgaatttccgcaagaaaccccggatgaatcaagtgacgaatgtccagat
ttgaggaacgcaatccggagccaccaccatctcttgataaccgctgaattgttgatcaaa
atggaatttcaattacgccgtattttctgtgccgttaataagtgccaccaaagaacactc
acggctgaaaattccagggtctacatcacgtttaaggaaatgttttcttccacaatcgat
gatagtggaacggaaaacaaattattatccttcctgggtgttgacgtcctgaatttgctc
atggatctgctgattttacctaaaggccccagaattcgcgatcgtttaggccacggcgag
cttgatttaagtcaatccgagaactttgaaaagtgggccaaaaccgtaacattcgtcaag
atacgaatcgcagagagcgaaacggataaggttgtagaatgtcaatatcgtcctcaattc
catccaattttcatcgttataagatcaatcgaaaccttggtgccgacaatctgtgatttg
cagtcctcaatgggaacggcgtccaaggactttgctcaagttctcgatttggaggtcgat
cccttgcccgatctttcttcgtggagagacactatcttgactagatgccagggcatccct
ttcaacctattggaccgccccccgcctgaatgttcagtgatatctattgtcaatcgttgg
actcgggctttaaaggatttcactgtggttctcgccaaggacgtacatcaaagaacaaga
aaactacactcccaagagtcgagtttgcgtcacttgtcttcatcacgaaagttattctcc
atgttccaagtggtgtctgaaactgttttgaaaagtatcatttctctaaccttcgttttg
aaggacttgcaatccttggatcccatggctctgggccaaattcaaaaaaccttgaagcag
acatgtatcatcaccgaaaagacagtagcccttgtcgataagagcaaatacgatgaactg
aaatacgctttgacggcctggttcaacttattaacggatttgcctcattcccaataa
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