Tigriopus californicus (tidepool copepod): 131883650
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Entry
131883650 CDS
T09700
Name
(RefSeq) gamma-1-syntrophin-like
KO
K24065
gamma-syntrophin
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
131883650
Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
131883650
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GFIT
Motif
Pfam:
Syntrophin_4th
PDZ
PH
PH_17
Motif
Other DBs
NCBI-GeneID:
131883650
NCBI-ProteinID:
XP_059087146
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All DBs
Position
7:complement(11535289..11549554)
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AA seq
598 aa
AA seq
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MPRWNKWEDGIPGTSGLEKDPNLRETKKRDSELAGSSFPSLLTSPIPLRIVNVSDGKCRP
QPARLKVCPEYLVLQKEEFIFPDDDDTYPRDNKKRTLRLKRQLDGSLGISVKGGSDHNLP
VLISKVCRNEDDDHPYIGDAIIKVNQMSLANVTHDEAINILRNAGPEVILTVKHYRSAAP
FLLKGVRQLIPEQEQNMDLVDGNSNNATSAPASGLEPRDERTPSIPSASTTSQSQQHPHQ
KFLPPFNASSSSSSTAQCDSRIRGTSCGSTPVIDSPCSVGSDGSLSWNGIPRVKRKWVDV
VEVPLMMAYITRYIFGTDKIRPNSFEVRGMNGSHTGVVHSPDLAVLSHWIKLISDYIIAL
TNVKAALLNRQLSSNEQISYMGWVAEGVLNSNQPWQNWTPRFFALKGIHVCVFDKPPIEA
KDWNGSHVQGYKTYEAMFRIIKESENVDERQHCFLIQTTGGESRYFSMETRADLLRLESA
WHRAVCFTIADLGSKTFHVVHKNLPAAFTIDWTDGFLLKSFASPNYHFIYAFSQLKSSSD
DGNSTLKLEFVDPPGTRELVEQVLICPKLQDLLFYMHAFLTAKVASLDPVFLNRGRLS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcccagatggaacaaatgggaagatggaatccctggaaccagtggccttgaaaaggac
cccaatttgcgagagaccaaaaaacgagattcagagttggctggatcctcatttccctct
ctactaacaagcccaataccattacggatagtgaatgtgagcgatggaaagtgccgccct
cagcccgccagattgaaggtctgtcccgagtatttggttctgcaaaaggaggaattcatc
tttccagatgatgacgatacctaccccagggataacaagaaaagaaccttgcgattgaag
cgacaactggatggaagtctcggcatcagcgtcaagggtggatcggatcacaatctacca
gttctaatctcgaaagtttgccgaaacgaggacgatgaccatccttacataggggatgcc
attatcaaagtgaatcaaatgtctttagccaatgtgacccatgatgaggccatcaatatt
cttcgcaatgccggccccgaggtcattctcacggtcaagcattaccgatcggcggctcca
ttccttctcaaaggtgttcgacaactaatcccggagcaggaacaaaacatggatcttgtg
gatgggaacagcaataatgctacctctgcacccgcatccggtctggaaccaagggacgag
aggacaccgtcgattccgtcagcctccaccacctcacagtctcaacagcacccgcatcag
aaattcttgccacctttcaatgcatcctcctcttcctcgtcaacagctcaatgtgattcc
aggatccgtggaacctcttgtggaagtacacccgtgattgactcgccgtgctcggtaggt
tccgatggatccctcagttggaacggtataccgagagtcaagcgaaagtgggtcgatgtg
gtcgaggttcctttgatgatggcttacatcactcgctatatcttcggaaccgacaaaatt
cgccccaattcgtttgaagtccgtgggatgaatggatctcatactggggtggttcacagt
ccagatttagctgtcctctcgcattggatcaagctaatctcggattatatcattgcacta
accaatgtcaaggctgctttacttaaccgtcaactctcctcaaatgaacagatctcatac
atgggttgggtggctgagggtgtgttgaatagcaatcaaccctggcaaaactggacccct
cgtttcttcgcattaaaagggatccatgtctgcgtcttcgataagccaccgattgaggcc
aaggactggaacggatcccacgttcaagggtacaaaacgtatgaggccatgttccgcatc
atcaaggagagtgagaatgtggatgagcgacaacattgctttctgatccaaaccacgggt
ggtgaatcgagatatttctccatggaaaccagagcggatcttctcaggctggagagtgct
tggcatcgggccgtgtgcttcaccatcgcagatcttgggtccaagacgttccatgtggtc
cacaagaatctccctgccgccttcaccatagattggactgacggtttcctattgaaatcc
tttgcctcgcccaattaccatttcatctacgccttttcacaactcaagagctcttcagac
gatggaaactccactctaaaactggaatttgtggatccaccaggaacaagagaactcgtg
gaacaggtattgatttgtcctaagctccaggatttattgttctacatgcacgccttcttg
acggccaaagtggcctcattggatcctgtgtttctcaaccgaggtcgactctcgtga
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