KEGG   Tigriopus californicus (tidepool copepod): 131883698
Entry
131883698         CDS       T09700                                 
Name
(RefSeq) beta-TrCP-like
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf04120  Ubiquitin mediated proteolysis
tcf04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    131883698
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    131883698
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tcf04121]
    131883698
   03036 Chromosome and associated proteins [BR:tcf03036]
    131883698
Ubiquitin system [BR:tcf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     131883698
Chromosome and associated proteins [BR:tcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     131883698
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_C Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_SCAP Beta-prop_EML_2 Beta-TrCP_D Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 F-box-like WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT122_1st NBCH_WD40 WD40_like Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_SPT8 F-box Beta-prop_VPS8 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 131883698
NCBI-ProteinID: XP_059087201
LinkDB
Position
7:6159041..6162296
AA seq 622 aa
MDDMDTGSNSGSASGDPIPRDFDEDEDDEVDDVDEVAQDVILSPLRGNGGGGVGVGGNGS
GSHNPEDRGHHSGLSRMMMLGGTSDDLPTPMQMSPSTYLMGGDSMSVSKGRSKSGTPGSP
VVSLVSGATDTAWANVAPTTKYEPSPKYLKEKCVCLNHFHSWTEQDQIDFVEDLLQGMCH
HQHGTVNAFLKPMLQRDFISLLPKKGLDHVAENILSYLDAQSLCAAELVCTSWLRVISEG
MLWKKLIERKVHTDSLWRGLAERRTWIKYLFIPKPGESHPDHSFYRRLYPSIIKDIETIE
NNWRCGKHNLQRINCRSENSKGVYCLQYDDNKIVSGLRDNTIKMWDRNSLSCLRVLNGHT
GSVLCLQYDDKVIISGSSDSTVRVWDVASGEMVNTLIHHCEAVLHLRFYNGMMVTCSKDR
SIAVWDMVSSTEINLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLN
GHKRGIACLQYLDRLIVSGSSDNTIRLWDIESGACLRVLEGHEELVRCIRFDSKRIVSGA
YDGKIKVWDLAAALNPRAPSGTLCIRTLMEHSGRVFRLQFDEFQIVSSSHDDTILIWDFL
NCSSVDGRSPSNPNSFHERRAH
NT seq 1869 nt   +upstreamnt  +downstreamnt
atggatgacatggatacgggctcgaactccggctcggcttcgggcgatcccattcctcgg
gatttcgatgaggacgaggatgatgaggtggacgatgtggacgaggtggcccaagatgtt
attttgagtccgttgcgcggcaatggcggcggaggcgtgggcgtgggagggaacgggagt
ggcagtcataaccctgaagatcggggccatcacagtggtctgtcccgcatgatgatgttg
ggtggcacgagcgacgatctacccacacccatgcaaatgtcgccctcgacctacctgatg
ggtggtgattccatgagcgtgtccaaagggcggagcaagtcgggcacgccgggtagtccg
gtggtgagtttggtgagcggcgccacggacacggcttgggccaacgtggccccgaccacg
aaatacgaaccctcgcccaagtacctcaaggagaagtgtgtgtgcttgaaccatttccat
tcgtggacggaacaagatcagatcgacttcgtggaagacttgttacagggcatgtgccat
catcagcacggcacggtcaatgcctttctcaaacccatgcttcagcgggactttatcagc
ctgctgcccaagaaaggcctggatcatgtggctgagaacattctcagctacttggacgcc
caatctttgtgcgcggccgagttggtgtgcacgtcgtggctgcgcgtcatctccgaaggc
atgttgtggaagaagctcatcgagcgcaaagtgcacacggacagtttgtggcgcggattg
gccgagcgccggacctggatcaagtatctgttcattcccaagccgggcgagtcgcatccg
gatcactcgttctaccggcgcctctacccgtccatcatcaaggacattgaaacaattgag
aacaattggcggtgtggcaaacataacctccagcgcattaattgccgctcggaaaactcc
aaaggcgtttactgtctccagtacgacgacaacaagatcgtttcgggtctgcgtgataac
accattaagatgtgggacaggaactcgttgtcctgccttcgcgtgctcaacggacacacg
ggttcagtgctttgcctccagtacgacgacaaagtgatcatttccggctcgtccgattct
acggtccgcgtgtgggatgtggctagtggtgaaatggttaacaccctgattcatcattgc
gaggccgtgctccatcttcgattctacaacggcatgatggtgacttgctcgaaggatcgg
tccatcgcggtgtgggacatggtgtcttccacggaaatcaacctccggcgcgtgctcgtg
ggccatcgcgcggccgtcaacgtcgtggattttgacgagaaatacattgtgtcagcttcg
ggtgatagaaccatcaaggtatggaacacctcctcttgtgagtttgtgcgcacactcaac
gggcacaagagggggatcgcttgcctccaatatctggaccgactgatcgtgtccggaagc
tcagacaataccattcgcttgtgggacatagagagtggagcgtgcttgcgggtgctcgaa
ggccacgaggaactggtccgatgcattcgatttgacagcaaacgcattgtgagtggcgca
tacgacggcaagatcaaagtctgggatctggccgccgcactcaaccctcgcgcaccgtca
ggaaccttatgcattcgtacactcatggagcattcgggtcgtgtctttaggctgcagttt
gatgaattccagatagtgagcagctcgcatgatgatactatcctgatttgggattttcta
aactgctcgtctgtcgatgggcggtctcccagtaatcccaactcattccatgaacgtcga
gctcactaa

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