Tigriopus californicus (tidepool copepod): 131883709
Help
Entry
131883709 CDS
T09700
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131883709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcf03009
]
131883709
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
131883709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltr_RsmB-F
PCMT
Motif
Other DBs
NCBI-GeneID:
131883709
NCBI-ProteinID:
XP_059087215
LinkDB
All DBs
Position
7:4593165..4594712
Genome browser
AA seq
321 aa
AA seq
DB search
MGPPGFSPRGGRGGGGRGAGGRGGGGFGGRGGGGGFSPRGGRGGGRGGFGDRGGGRGGGF
SPRGRGGPRGAPRGRGGPRGGGRGGPRAVVVEPHRHGGVFIARGKEDALVTLNLVPGEAV
YGEKRISVEEGDKGKIEYRVWNPFRSKLAACILGGVDGIHIAPGSKVLYLGAASGTSVSH
VSDVVGPEGMVYAVEFSHRSGRDLINMAKKRTNVVPIIEDARHPHKYRMLVPMVDTIFAD
VAQPDQARIVAINAQYFLKNEGHFVISIKANCIDSTAEAEAVFAGEVKKMRGERMKPLEQ
VTLEPYERDHAVVVGVYRPPE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgggacctccgggattctcgccgcgtggcggtcgtgggggtggtggacgcggggctggc
ggacgcgggggtggtggattcggcggtcgtgggggtggcggcggtttttcaccgcggggc
ggccggggcggtggtcgagggggatttggtgatcgtgggggtggacgcggtggaggattc
tctcctcgcgggcgaggtgggcctaggggtgcgccccgtggacgcggaggtcctcgcgga
gggggacgaggagggccccgagctgttgtggtcgagccccatcgtcacggtggcgtattc
atcgcccggggaaaagaggatgccctggtcacgttgaatttggtgcctggtgaggcggtg
tacggcgagaaacggatctcggtcgaggagggcgataagggcaagattgaatacagagtc
tggaatcctttccgctccaagttagccgcatgcattttgggcggcgtggacggcattcac
atcgcacccggatcgaaagtgttatatttgggcgctgcctcgggcaccagtgtttcccac
gtatcggacgtggtgggaccggaaggtatggtttatgccgtcgaattctcgcacagatct
ggccgtgatctgattaatatggccaagaagcgcactaacgttgttccgatcattgaggat
gctcgtcatcctcacaaatatcgtatgttagtacccatggtagacaccattttcgcggat
gtggctcaacccgaccaggctcggattgttgcgatcaatgcccagtatttcctcaagaac
gagggccatttcgtgatctcaatcaaggctaactgtatcgattccacggcggaggctgaa
gctgtgtttgccggcgaggtcaagaagatgcgcggtgaacgcatgaagcctctcgaacag
gttaccctcgagccttatgagcgtgaccacgccgtcgtggtgggagtttaccgaccgccc
gaataa
DBGET
integrated database retrieval system
