Tigriopus californicus (tidepool copepod): 131883781
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Entry
131883781 CDS
T09700
Name
(RefSeq) piwi-like protein Siwi
KO
K02156
aubergine
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcf03036
]
131883781
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131883781
piRNA pathway
131883781
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
Piwi_N
ArgoN
ArgoL1
Amido_AtzD_TrzD
Motif
Other DBs
NCBI-GeneID:
131883781
NCBI-ProteinID:
XP_059087324
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Position
7:complement(7487012..7511134)
Genome browser
AA seq
940 aa
AA seq
DB search
MSGRANPGSTVPPGPPPRKGEPPPPAGTGRTSGRGGPPPRLSSQLESEPVGGSRGRAQDA
SSGNIPGGPSGRGAAQGLPPPIASPANKALFKRSPLPIMGAPRGPTPPPHRAMDSGSGSE
CPSSAIESLTLDSNGSAATGVGTFPDSTNGGNNGQAKKLGVADSAISLGRGSSRGRPDRR
TEVFKTRPEELVSKRGSAGDAVSLLTNHFQVNFPTDWALKQYRVDFSPDEDNLGFKKAMI
HQHDEILGTYIFDGSIIFTPQKYCEPMDLFSKSREGKTYKINIRLVGTVKPTDGHFFHFL
NIIARNCLQGLKLQLIGRNYFDPQARTTYPEFKLELWPGYMTSIRQHEEKVLICCDSGVK
IIRTDSVLEQMTQIRDRGAILRKLLGLIVITRYNNRTYRIDDIDFGKNPEFKFKKSDDSE
VSIKEYFKQRYNLDIKNASQPLLVSQPKARDVRGGRTSPALLVPELCFMTGLGEEHQNPR
VKNALGNNIRPTPDNRVETLLKFSKRMQSTPSVVKELSGWQMSLCPDILKIPARTLAPEK
IRQGMNKAPLTYGVDNADWGSGIGRGKLLSAAPLERWMVIAPLMFKGPTEEFVAMIPKVG
GSMGFQIRNPLFHFLPERRVSNYVTKLQEVVKLKPSMIMIVIDGDDVYKAVKKTLYVDNA
IPCQVMKKSTLMRPKGLMSVATKVAIQMAAKLGAEPWGVVSVPKNTMIIGYDSFHDTANR
NTSVGAVVASINNDLTRFTSSCTFHKNNEELLNQMEMCFSKAIQAYQKANGGLPERLIVY
RDGVGDGQIEYVKETEIVSIQTVCRKLHFEPKLTFIVVSKRINTRFFKPLSGSKVTNPPS
GTIVDDVVTLPERYDFFLVSQSVRQGTVNPTSYNVIEDNSGWGPDNIQRLTYKLTHLYFN
WPGTVRVPAPCQYAHKLAYLVGESLHKAPNEALEDLLYYL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcgagccaatccagggtccactgtcccaccagggccaccgcctcgaaaaggt
gaacccccgccacctgcaggcacgggtcgcacctctggccgtggtggacctccgccccgc
ctctccagccaactggaaagtgaacctgtggggggatctcggggtagggcgcaagatgct
tcttcagggaatattccgggcgggcctagcgggagaggggcagcccaagggctgccaccc
cctatcgcttcgccggccaataaagctctgtttaagcggtcgcccttgcccattatgggt
gccccgcgtggccccaccccacccccacatcgggctatggatagcgggagtggtagcgag
tgtcctagttcggcgattgaaagcctgacgctggattcgaatggctctgctgccacggga
gtgggcaccttcccagactccacgaatggagggaacaacgggcaggccaaaaaactgggt
gttgcagattcagcaatatcgctcggacgcggctcttcacgaggtcgtccagataggaga
actgaagtgttcaaaacccgccctgaggaattagtatccaaacgtggaagtgctggggat
gcagtttcgcttttgacaaatcacttccaagtcaatttcccgacggattgggctttaaag
cagtacagggtcgacttttccccagacgaagataatcttggattcaagaaggccatgata
catcaacatgatgagatccttggaacatacatttttgatggatctattatcttcactcca
caaaagtactgcgagccgatggatttgttttctaaatccagggaagggaagacttacaaa
atcaacattcgtttggttggaaccgtgaaaccaactgacgggcacttctttcattttctc
aacatcattgccagaaactgcctccagggtttaaagctgcaattgattggcagaaactac
tttgacccacaggcacgaactacctaccccgagtttaaactagagttgtggccaggctat
atgacgtccattcgacagcacgaggagaaagttcttatttgttgcgactctggtgtcaag
ataataagaacagattccgtgttggaacaaatgacacagatcagagatcgaggagccatt
ttaaggaaactcttgggattaatcgttataacaagatacaacaatcgaacctatcgcatt
gacgacatagattttgggaagaatccagaattcaaattcaagaaatctgatgatagtgag
gtgtcgatcaaagaatatttcaaacaaaggtacaacttggacatcaagaatgctagtcaa
cccttattggtgagtcaaccaaaagctcgtgatgtacgtggtgggcgaacatctccagcg
ctattggtgccagagttatgttttatgactggattgggcgaggagcaccaaaatcccaga
gtgaaaaacgctctcggaaacaacattaggccaacgccagataacagagtcgaaacactg
ctgaaattctccaagagaatgcaaagcactccatctgtggtcaaagagctgagcgggtgg
caaatgagtttgtgtcccgacattctcaaaattcctgccaggactctagcccctgaaaag
attcgccaaggcatgaataaggctccactcacttatggtgtagacaatgctgactgggga
agtggtattgggcgtgggaagttacttagtgctgctcccctagagcgatggatggttata
gcccctctaatgttcaaagggccgacggaagaattcgttgcgatgatacccaaagttgga
ggaagtatgggttttcaaatacgaaatccgttgttccactttctgcccgagaggagagtg
tctaattacgttaccaaactgcaagaggtggtgaagctaaaaccaagcatgataatgatt
gtcattgatggcgacgatgtttataaggctgtcaagaaaaccctgtatgtcgacaacgcc
attccttgtcaggtgatgaaaaaaagcaccttaatgagacccaaaggcctgatgtccgtt
gccacgaaagtggccattcagatggctgctaaactgggtgcagaaccatggggggtagtg
agtgttccgaaaaacacaatgattattggatacgacagttttcacgacaccgcgaatcga
aatacttcagtgggtgccgttgtagcatcgattaacaacgatctgacgcgatttacttca
tcttgtacatttcacaagaataacgaggaattgctgaatcaaatggaaatgtgcttctct
aaagcaattcaagcctaccaaaaggccaatgggggactgcctgaaagattgatcgtatat
cgtgatggagtgggtgatggccaaattgaatacgtgaaagagactgaaattgtttcaatt
caaacagtatgccgaaagctgcacttcgagccaaaattgaccttcatcgtggtatcgaag
cgcataaacacccgctttttcaaaccattgtccggctctaaagtgacgaatcctccttct
ggaactattgtcgatgacgtggtaactcttccagaaagatacgacttctttctagtctct
cagtcggttcggcaaggaacagtcaaccccacatcttataatgtcattgaagacaactct
ggttggggccccgataatatccaaaggttgacatataagcttactcacttatatttcaat
tggccgggaactgtaagagttccagctccctgccaatatgctcacaagttagcttatcta
gttggagagagtctccacaaagcaccgaacgaagctctggaagatctattatattatctg
tag
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