Tigriopus californicus (tidepool copepod): 131883795
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Entry
131883795 CDS
T09700
Name
(RefSeq) exportin-1-like
KO
K14290
exportin-1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03008
Ribosome biogenesis in eukaryotes
tcf03013
Nucleocytoplasmic transport
tcf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131883795
03008 Ribosome biogenesis in eukaryotes
131883795
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
131883795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131883795
03009 Ribosome biogenesis [BR:
tcf03009
]
131883795
03016 Transfer RNA biogenesis [BR:
tcf03016
]
131883795
03036 Chromosome and associated proteins [BR:
tcf03036
]
131883795
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
131883795
Ribosome biogenesis [BR:
tcf03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
131883795
Pre-60S particles
131883795
Transfer RNA biogenesis [BR:
tcf03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
131883795
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
131883795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
NFACT-R_1
Motif
Other DBs
NCBI-GeneID:
131883795
NCBI-ProteinID:
XP_059087341
LinkDB
All DBs
Position
7:5195741..5201183
Genome browser
AA seq
1077 aa
AA seq
DB search
MAVTVGVLAQETVNKLLDFNQKLDIGLLDEVVSTMYAGTGEQQKMAQEVLTTLKEHPDAW
TKVDTILEFSNNQQTKYYALQILESVIKTRWKVLPRNQCEGIKKYIVGLIIKTSSVPESL
EREKTYLNKLNMILVQILKREWPKNWESFIPDIIGASKTNESLCQNNMVILKLLSEEVFD
FSSGQMTQTKAKHLKDTMCAQFSEVFQLCQFVLDNSQNAPLVAATLETLLRFLNWIPLGY
IFETKLINTLIFKFFNVPMFRNVTLKSLTEIASVSVNHYDEIFLTLFTQALQQLDEMLPV
ETNIKEAYATGQDSEQQFIQDLALFLCTYLKEHGVLLEKQNANETLLKALHYLLLISEVE
EVEIFKICLEYWNSLCTDLYRESPFSSSSSPLFMSRPSPATPQRKQFYQPLLTKVRYIMI
SRMAKPEEVLVVENDQGEVVREFMKDTDSINMYKNMRETLVYLTHLDYLDTERIMSEKLQ
NQVNGNDWSWKNLNTLCWAIGSISGSMHDEDEKRFLVTVIKDLLGLCEQKKGKDNKAIVA
SNIMYIVGQYPRFLRAHWRFLKTVVNKLFEFMHETHEGVQDMACDTFIKIAQKCRRQFVQ
IQVGEVMPFIDELLANINSIICDLQPQQVHTFYEAVGHMISASSDSQQQEQLIDKYMQLP
NQVWDDIINQASKNVDVLKNPEAVRQLGSILKTNVRACKALGHPFVAQLGRIYLDMLNVY
KVMSENISTATRLNGEVVTRQPLIKSMRVVKKETLKLISCWVERSNDPNMVLENFIPPLL
DAVLLDYQRCLVPSAREPEVLSTMAVVVNRLKNTITSEIPKIFDALFECTLEMINKDFEE
FPEHRTNFFILLQAVNLYCFQAFLNIPATQFKLVLDSVIWAFKHTMRNVADTGLNILFQL
LKNVSNHPEAAQSFYQTYYTDILQHMFSVVTDTSHTAGLTMHATILAYMFTLVEANKITV
SLSSNPAVAGAPANNVAFVQDFVANLLRTAFPQLTDNQIKITVQGLFNLDQDIPGFKEHL
RDFLVQIREFTGEDDSDLFLEEREAALKQAQDEKRKLQIAVPGILNPHELPEEMQEM
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgacggtgggcgtgttagcccaagagacggtgaacaagttgctggacttcaat
cagaagctggatatcggcttgctggatgaggtggtgagcaccatgtatgcgggcacgggc
gagcagcaaaagatggcccaagaggtgctgaccacgctcaaggagcatcccgatgcctgg
accaaagtggatactatcttggagttctccaataaccaacagaccaagtactacgcccta
cagatcctagagagcgtgatcaaaacacgctggaaggtgctaccccgaaatcaatgtgaa
ggcatcaaaaagtacatcgtgggtctgattatcaagaccagttccgtgcccgagagcctc
gagcgcgagaagacttatttgaacaagctgaacatgatcctggtccagatcttgaaacgg
gaatggcccaagaattgggagtcgttcatcccggacatcattggcgcctccaagaccaac
gagtctctctgccagaataacatggtcattttgaagttgctgagtgaagaggtgttcgat
ttctcgtccggtcagatgacccagaccaaggccaaacacctcaaggacacgatgtgcgca
caattctcggaagtgtttcagttgtgtcagttcgtgttggacaactcgcagaacgcgccc
ctagtcgccgccacattggagacactccttcgctttctcaactggattcctcttggctac
atcttcgagacgaagctcatcaatacgctcatcttcaagttcttcaacgtgccaatgttc
aggaatgtgacgctgaagtcgcttaccgagatcgcctccgtctctgtcaatcactacgac
gagatcttcctgaccctcttcactcaggcccttcaacaactcgacgagatgctgccagtg
gagacgaatatcaaggaggcttatgccaccggtcaggactccgagcagcaattcatccag
gacttggcactcttcctctgcacctatctcaaagagcacggtgtcctgctcgagaaacag
aacgccaatgaaactctgttgaaagccctccactacttgctcctcatctccgaggtggaa
gaggtcgagatcttcaagatttgtctcgagtattggaatagtctatgcacggacctctac
cgtgagagcccgttctcctcgagctcgtcacccctgttcatgtcacgccccagtccggcc
actcctcaaaggaaacagttctaccaaccacttctgaccaaagtccgatacatcatgatc
tcgcggatggccaaacctgaagaggtactggtcgtggaaaatgaccaaggcgaagtcgtc
agagagttcatgaaagacacggactcgatcaacatgtacaagaacatgcgcgaaacactc
gtctacctgactcatctggactatttggacactgagcggatcatgtcggagaagctgcag
aatcaggtcaacggcaacgattggtcgtggaagaatttgaacacgctctgctgggccatt
ggctccatatccggctccatgcatgatgaagacgagaagcgcttcttggtaactgtcatt
aaggacctgctggggttgtgtgagcaaaagaagggcaaggacaacaaggccatcgtagcc
tcaaacatcatgtatattgtgggtcagtacccgcgtttcttgcgcgcccattggcgattc
ctcaagaccgtggtgaacaagttatttgagttcatgcacgagacgcacgagggtgttcaa
gacatggcttgcgacacatttatcaagattgcccagaagtgtcgccgccaattcgttcag
atccaagtgggtgaagtgatgcccttcatcgatgagctgcttgctaatatcaattccatc
atctgtgacttgcagccgcaacaggtccatacgttctacgaagccgtagggcacatgatc
tcggccagttcggactcacaacagcaagagcaacttatagacaaatacatgcagctgccc
aatcaggtgtgggacgatattatcaatcaggcgtcgaagaatgtcgatgttctcaaaaat
cccgaggctgtgagacagctgggcagtattctcaaaaccaacgtgagggcctgcaaagcc
ctcggccatccgttcgtcgcccaactgggcaggatctacctggacatgctcaatgtgtac
aaggtgatgtccgagaacatttccacggccacgaggctcaacggagaagtcgtcacgcgc
caacctctcatcaagagcatgcgagtggtcaagaaagaaacccttaagttgatctcgtgt
tgggtggaacgctctaatgatcccaacatggtcctagaaaacttcatcccaccactactc
gacgccgtcctgcttgattaccaaaggtgcttggtgccctcggcccgagagcccgaagtg
ctctccaccatggccgtggtggtcaatcgcctcaaaaacaccatcacgagcgagatcccc
aagatctttgacgccctcttcgaatgcacgctcgagatgatcaacaaggacttcgaggag
tttccggagcatcggaccaatttcttcattctccttcaggcggtcaacctctactgcttc
caagcatttctcaacatccccgccacacaattcaagcttgtcctcgactcggtcatctgg
gctttcaagcacacgatgcggaacgtggccgacaccggcctgaacattctattccaactg
ctcaagaacgtgtccaaccacccggaggcagcccaaagcttctatcagacctactacacc
gatatccttcaacacatgttcagtgtggtcacagacacgtcacacacggcaggtctgacc
atgcacgccaccatcctcgcctacatgttcaccttagtggaggctaataaaatcaccgtg
agtctgagctcgaatcctgccgtggccggtgctccggctaacaatgtggcctttgtgcaa
gactttgtggccaatctccttcgcactgccttccctcaattgacggacaatcagatcaag
atcacggtccaaggcttgttcaacctggatcaggacatccccgggttcaaggagcatttg
cgagacttcctcgtccaaatccgcgagttcaccggcgaggacgattccgatctctttttg
gaggagcgggaagctgccctgaagcaagcccaggatgaaaaacgcaagcttcaaattgcc
gttccgggtatcctgaatccccacgagctgcccgaggagatgcaggaaatgtga
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