Tigriopus californicus (tidepool copepod): 131883867
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Entry
131883867 CDS
T09700
Name
(RefSeq) beta-hexosaminidase subunit alpha-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00511
Other glycan degradation
tcf00513
Various types of N-glycan biosynthesis
tcf00520
Amino sugar and nucleotide sugar metabolism
tcf00531
Glycosaminoglycan degradation
tcf00600
Sphingolipid metabolism
tcf00603
Glycosphingolipid biosynthesis - globo and isoglobo series
tcf00604
Glycosphingolipid biosynthesis - ganglio series
tcf01100
Metabolic pathways
tcf04142
Lysosome
Module
tcf_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
131883867
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
131883867
00513 Various types of N-glycan biosynthesis
131883867
00531 Glycosaminoglycan degradation
131883867
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
131883867
00604 Glycosphingolipid biosynthesis - ganglio series
131883867
00511 Other glycan degradation
131883867
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
131883867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tcf03110
]
131883867
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
131883867
Chaperones and folding catalysts [BR:
tcf03110
]
Intramolecular chaperones
Others
131883867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Motif
Other DBs
NCBI-GeneID:
131883867
NCBI-ProteinID:
XP_059087449
LinkDB
All DBs
Position
7:5259207..5264131
Genome browser
AA seq
575 aa
AA seq
DB search
MNSPVRVVTCLLYAFITFCGVNAEGDDFKPIPPKAGSWVGPTTGEVWPNPQIRFRQNSFF
VLQVDQFEFKLNNAAASSDIVNESVVRFKDRMFPGQAQRAREARQTRFRFQPPLNGREST
EFSYNVGQLDTIHVILESACGNCEKYPYMGMNETYEIVLNPDSSEEQFVVSSSVWGLLRG
LESISQMVYISPENNYSYQINVTRVIDFPRFPHRGFMLDTARHYLSMNTILQTLDLMEMN
KLNVLHWHIVDTESFPYQSTTFPDLSAKGAYDPYTHVYSQEDVRLIIESARVRGIRVMVE
FDTPGHTQSWEKGQPGLLTECYDPTTERPNGRYGPMDPTKNEVFEFLTELYQEISEVFPE
EYIHIGGDEVSTNCWRSNPFVNDFMNQWNITGDYKRLESYFIETLLVIVDKLPRNNIPVV
WQEVFDNGDNISPETVVQVWKNWGIGWRNRMQAITTAGQPAILSAPYYLNYIKYGSDWVE
MYEEDPHDFAGTEEDKQLVLGGETCIWAEFVNSINLIPRAWPRASAVAERLWSSRDTRNI
SEASSRLQEHECRMLGRGYPVSPVVGAGFCSVKWN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaattctcctgtccgagtggtaacttgtctcttgtatgctttcattactttttgtgga
gtgaacgcggaaggcgacgatttcaagccgattccacccaaagctggatcatgggtgggg
ccaacaacaggggaagtatggccaaacccgcaaattcgatttcgacagaacagctttttc
gtgcttcaagtggatcaattcgaattcaagttaaacaacgcagctgcttctagcgatatc
gtgaacgaatccgtggttcgttttaaggaccgcatgtttcctggccaagcccaacgggct
cgagaagctcgccaaactcgttttcggttccagcctccgttaaatggtcgcgagtccaca
gaattcagttacaatgtcggtcaactcgatactattcacgtgattcttgaatctgcttgt
ggaaactgcgaaaaatatccttacatggggatgaacgaaacttatgaaattgtgctgaac
cctgattcttccgaggaacaattcgtggtttcatccagcgtttggggtttgctcagagga
ttggaaagcatttcccagatggtgtacatttctcccgaaaacaattattcctatcaaatc
aatgtcacccgagtgatcgactttccacggtttcctcatcgaggtttcatgctggacact
gcccgccattacttatccatgaatactatccttcaaacattggatttgatggaaatgaac
aaactcaacgtgttgcattggcatattgtggataccgagagcttcccttaccaaagtacg
acgtttccggatctgagtgccaagggagcatatgacccttacacccatgtttactctcaa
gaggatgtgagactgatcattgaaagtgctcgtgttcgtggcattcgagtgatggttgaa
ttcgacacccccggacacacccaatcgtgggaaaagggacaacccggccttttaaccgag
tgttacgacccaaccacagaacgaccaaatggacgatatggtcccatggaccccaccaaa
aatgaagtgttcgagttcttgacagaattgtaccaagaaatttccgaggtgtttcccgaa
gagtatattcatatcggaggcgatgaagtttccactaattgttggagaagcaatcctttc
gtcaatgactttatgaatcaatggaacataacgggggattacaagcgattggaatcttat
tttatcgagacgctcctcgttatcgtggacaaactgccaagaaataatattccagtggta
tggcaagaggttttcgataacggcgataacatttctcctgaaacggtggttcaagtgtgg
aaaaactgggggatcggatggcggaatcgaatgcaggcgatcacgactgcaggccaaccg
gctattctctcagccccatattatttgaactacatcaagtacggctcggactgggttgaa
atgtacgaagaagatccccacgactttgcaggaacggaagaagacaaacaattggtttta
ggtggagagacttgcatttgggcggagttcgtgaactcgatcaatttgatcccgagggcg
tggcctcgtgccagtgccgttgcagagcgattgtggtccagccgcgataccagaaatatt
agcgaggcctcatcgcgattacaagagcacgaatgtcgtatgctgggtcggggatatccg
gtttctcccgtggttggcgccggattctgtagtgtgaagtggaattaa
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