Tigriopus californicus (tidepool copepod): 131883934
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Entry
131883934 CDS
T09700
Name
(RefSeq) protein Rae1-like
KO
K14298
mRNA export factor
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131883934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131883934
03036 Chromosome and associated proteins [BR:
tcf03036
]
131883934
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131883934
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131883934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_EML
eIF2A
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_RSE1_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
131883934
NCBI-ProteinID:
XP_059087526
LinkDB
All DBs
Position
7:5885943..5888090
Genome browser
AA seq
367 aa
AA seq
DB search
MFGSSSAFGASNPGTGGFGAANQTGSTNPMKDFEVSAAPDDSVSCLRFSPPALNSTFLIA
GSWDNNVRLWEIQANGTSEPRHQQSMQGPILDVCWQDDGSKVFMASCDKQVKMWDLGSNQ
TMQVAEHGAPIKSIRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADVD
YPMAVVGTAGRGIIIYSLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGR
VAIQYANATNPKDNFTFKCHRSNGVSNGFQDIYAVNDLAFHPQHGTLATVGSDGRFSFWD
KDARTKLKTSEPMDQPITACSFSSNGQIFAYAVSYDWSRGHEFYNPQKKNYIFLRPCFDD
LKPRAKP
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctcgagctcggccttcggtgcgagcaatcccggcacgggtggattcggcgcg
gccaatcagaccggctcgaccaatcccatgaaagacttcgaagtgagtgccgcccccgac
gattcggtgtcgtgtctgcggttctcgccgcccgctctcaatagcaccttcctcatcgcc
ggatcgtgggacaacaatgtgcgcctttgggagatccaagccaatggcacctccgaaccc
aggcatcaacagagcatgcagggcccgattttggatgtctgttggcaagatgatgggagc
aaagtgttcatggcttcgtgtgacaagcaagtcaagatgtgggacttgggctcgaatcag
acgatgcaggtggccgagcacggcgcgcccatcaaatccatccggtgggtcaaggctccc
aattacacggccctcatgaccggctcgtgggacaaaaccctgaaattctgggacacacgc
tctcccaatcccatcatgagcatcgacttaggcgagcggtgttactgtgctgacgtggac
tatcccatggccgtagtgggcacggccggaagaggcattatcatctattccttagaaggc
caacccaaagagttcaagcggatcgaaccgccgctcaaatatcaacatcgctgcatctca
gtctttaaagataagaagggacaacccaccggctttgctttggggagtgtggaaggacga
gtggccattcagtatgccaatgccaccaatcccaaggataatttcacgttcaaatgccat
cgttcgaatggcgtgagtaacggtttccaagacatttatgccgttaacgatttggcattc
caccctcaacacggaacgctcgctacagtcggctcagatggacgattctcgttttgggac
aaggatgcccggaccaaactgaaaacgtcggagcccatggaccaacctatcacggcctgc
tcatttagcagtaatgggcagatttttgcttatgccgtcagctacgattggtctcggggc
cacgagttttacaatcctcagaagaagaactacatctttcttcggccgtgctttgacgac
ctgaaaccccgagccaaaccttga
DBGET
integrated database retrieval system
