Tigriopus californicus (tidepool copepod): 131883978
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Entry
131883978 CDS
T09700
Name
(RefSeq) homeobox protein six1b-like isoform X1
KO
K15614
homeobox protein SIX1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131883978
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
131883978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
131883978
NCBI-ProteinID:
XP_059087574
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All DBs
Position
7:complement(9338440..9350635)
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AA seq
346 aa
AA seq
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MPPMSEYSALTHLSSTPLSGQDTSGISASHYPQTSSSAVNHFQPSLVNFSPTPESPLYSA
SSQTSDSLAAFGFTQEQVACVCEVLEQSGNVDRLARFLWSLPPCEILHRNESVLKAKTLV
YFNKGNFKEMYRIIESFQFSEQNHPKLQMLWMKAHYIEAEKLRGRPLGAVGKYRIRRKFP
LPRTIWDGEETSYCFKEKSRQVLREWYNHNPYPSPREKRELADATGLTTTQVSNWFKNRR
QRDRASENNGCENAEHKDDMDSTDCSDFNKFEQDEANDEQEDVKRKGPRLIPSASSITAE
GPGIDGTHGSKSLLPQFFGKMMSFSHCQSAVLPYYSHPYYSERQPL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaatgtcggaatattcagcattaacccacttgagctcgacacctttgagtgga
caggacacaagtggcattagtgccagtcattatccacagaccagcagcagtgcagtgaac
cattttcagcccagtttagtgaatttctcgcccacacccgagtcgccattgtactcggcc
tcgtcacaaacctcagattcgctagccgcattcgggttcacccaagaacaagtcgcttgt
gtctgcgaggtcttggagcaatccggaaatgtggatcgtctagccagatttttgtggagt
ttgccaccatgtgaaatactccatcgcaacgagagtgttttaaaagccaaaactttagtt
tatttcaataaaggtaatttcaaggagatgtacaggatcatcgagagctttcaattttcg
gaacaaaaccatccgaagctgcaaatgctgtggatgaaagcccattacatcgaggcagaa
aaacttcgaggccgacctttgggcgccgtagggaaataccgaatccgccgaaagttcccc
cttccacgaacaatttgggacggcgaagagacgtcatattgtttcaaagaaaaatctcga
caagtgctccgcgaatggtacaatcacaacccttatcccagtcctcgggagaaacgggag
ttggcagatgccactggtctaaccaccacacaagtgtcgaattggttcaagaatcggcga
caacgcgatagggcctcagaaaataatggatgcgagaatgccgagcataaagatgatatg
gattcgacagattgttcagacttcaataaatttgaacaagatgaggccaatgatgagcaa
gaggacgtaaaaagaaaagggcctagactcataccatcggcctcgagtattacagcagaa
ggtccaggaatcgatggaacccatggatcaaaatcacttttgccgcagtttttcggcaag
atgatgtccttttcgcactgtcagtccgccgttcttccttattattctcacccatattac
tcagagcgacaacctttgtga
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