Tigriopus californicus (tidepool copepod): 131884021
Help
Entry
131884021 CDS
T09700
Name
(RefSeq) nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131884021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131884021
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131884021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
131884021
NCBI-ProteinID:
XP_059087631
LinkDB
All DBs
Position
7:complement(8658564..8660890)
Genome browser
AA seq
866 aa
AA seq
DB search
MAGFATDFGDLLQSAEQLTAEFAQATPLLFRAAHGGSGGGAGAGHDLPRVERNLSQLVEA
GQQLLTQATRGRRAGEADPSARDEEAEAAILLGSRGVDLPGLKAQLASLSRAGQTEASAP
LEALPPTDIAGFLRNERENAILSVIEETRSETLAQVERLHWGAVSAEWEQDKRRILHALG
GPPGPGSDLLELTRSIRPERSRVHDSTLHAGRSTLDHEEVAYAQVVSRYNEAVASGGGSL
KPDLVDHFGRLFQPERDQEVSALWEITRSLVRNLPPAPNQASKIATWRASDVCQKAVVQA
AQNYLEADFKKFITTTVFNNMPKAQLGGIPGTYQLVRSFLKVQIPPNTPGLEDGLIDGAP
VWAMIFYALRCGDVKAAIQSANQAGQGLSDMTKFLTEVNTSVDQRLTPHSDNIVKLAYRR
SIRSTTDPFKRAVYCLLGACDPSDEHNEIATSLDDYLWLKLYQIRGDDEIASSHALDHLT
LTKLQIQMSEEYGESHFNAYEKPLLYFQVLFLTGQFEAATEFLFRTNRFRAHAVHIALSL
FEIRILLLPRNIQAALLSRESGDRNPLRRLNIARLIMLYVKKFESTDPKEALQYFYFLRN
ERGTKDENLFMSCVSALVLESREFDLLLGQLTQDGTRAPGLIDRLQNSPGDSQRVIELVA
QDSEQKGMFEDGVKLYDLARKHDKVIELLNKLLAQVIAQPASVESRRDRLQRQSVDVAKR
YRSLGHGASKANIESFYLLLDLMTFFDLYHMKKFDDALDTLAKLKLVPLLVSEIDLMVGN
FRLLQEEIRRNIPDLLLSAMSILFAQYKQSKSATPGRGMGQDGGRERHLDTLRDRAKALI
TYAGMIPYRMPGDTNARLVQMEVLMN
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcgggattcgccacggatttcggggatttgctccaaagcgccgagcaattgacggcc
gaatttgcgcaagccacgccgttgctcttccgcgcggctcacggtgggagtggcggtggc
gccggggccggccatgacctgccccgcgtcgagcggaatctgtcgcagctggttgaagcc
ggtcagcagctactaacccaagccacgcgtggacgacgggctggtgaggccgatccgagt
gcgcgcgatgaggaagccgaggcagctattctcctgggctcgcgcggggtggatttgccg
ggcttgaaggcccagttggcgtctttgagccgcgccggtcaaactgaggcctcagctccg
ctggaagcgcttccgcccactgacattgccggttttttacgcaacgagcgtgagaacgcc
atcctgtcggtcattgaagagactcgctcggagactttggcgcaagttgagcgcctgcat
tggggcgcggtgtctgccgagtgggagcaagacaagcggcgcatcttgcatgctctgggc
ggcccgcccggtccaggctccgatctattggaactcacccgctctattcgtcctgagcgc
agtcgcgtgcatgattccacattgcatgccggccgctcgactttagatcatgaggaggtg
gcctatgcccaagtggtcagccgctataatgaggcggtggcttcaggtggcggatcgctg
aaacccgatctggtggatcactttggtcgccttttccaacctgaacgggatcaagaagtt
tcggccttgtgggaaatcacgcggagcttggtccgaaatctcccgcccgcacccaatcaa
gcctcgaagatcgccacttggcgggcctcagatgtctgtcaaaaggccgtggtgcaagcc
gctcagaattatttggaagccgatttcaaaaaattcatcaccaccaccgtgttcaataac
atgcccaaggctcagctaggtggcatacccggcacttaccaattagtgcgtagcttcctc
aaggttcaaatcccaccgaataccccggggctagaagatggtttaattgacggggcgccg
gtctgggccatgattttttacgcccttcgatgtggcgatgttaaagccgccattcaatcg
gccaatcaagccggtcaaggattgtcggacatgaccaagtttctgacagaagtcaacact
tccgtggaccaacgtcttacgcctcactcggacaatattgtgaaactagcttatcgccga
tccattcgctctaccacggatccttttaaacgggcggtttattgcctccttggggcgtgt
gatccatcggatgaacataatgagatcgccacttcattggacgactacctatggctgaag
ctgtaccagattcgcggggacgatgagattgcctcttcccacgccttagatcacttaacg
ctgaccaagttgcagatccaaatgtctgaggaatatggcgagtctcatttcaacgcctat
gagaaaccgcttttatactttcaagtgctatttctcaccggacaatttgaagctgccacc
gagttcctattccggaccaaccgattccgagcccacgccgttcacattgccctatccttg
ttcgaaatacgtatccttctattgcctagaaacattcaggccgccctgctctcgcgagaa
tcaggcgatcgcaatccattgagacggctcaacattgcccgtctcatcatgctttatgtg
aaaaagtttgaaagcacggatcccaaggaggccctccaatacttctacttcctccgcaat
gaacgtggaacaaaagatgagaatctcttcatgtcctgcgtgagcgctctggttttagag
tcccgtgaattcgacctacttttgggacaactcacgcaagatggaactcgagccccggga
ttaattgatcgccttcagaactctcccggggactctcaacgagtcattgaattggtagcc
caagattccgaacagaaagggatgtttgaggatggagtgaaactctacgacttggctcgc
aagcatgacaaagtcattgaactgttaaacaagctactggctcaggtcattgcccaaccc
gcgtctgtggaatcccgccgagatcggctgcaacgccaatctgtagatgtggccaagcgc
tatagaagtctcggacatggggcttctaaggctaatattgagtcattttacctcttgctc
gatctcatgaccttcttcgatctgtatcatatgaagaaatttgacgatgccctggataca
ttggccaagttaaagctcgttcctctgttggtctccgagattgatctcatggttggcaac
tttcgtcttctccaagaggagattcgtcgtaatattcccgaccttttgctctcagctatg
agtattctatttgcccaatacaaacagagcaaaagtgctactccagggcgaggcatgggt
caagatggaggaagagaacggcatttggataccttacgagaccgagccaaagccctcatc
acgtatgcggggatgatcccttatcgaatgccgggtgacaccaatgctcgactcgttcaa
atggaagtcctaatgaactaa
DBGET
integrated database retrieval system
