Tigriopus californicus (tidepool copepod): 131884025
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Entry
131884025 CDS
T09700
Name
(RefSeq) acid-sensing ion channel 1-like
KO
K04829
acid-sensing ion channel 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131884025
Ion channels [BR:
tcf04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
131884025
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Gene cluster
GFIT
Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
131884025
NCBI-ProteinID:
XP_059087642
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Position
7:complement(3429642..3454151)
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AA seq
483 aa
AA seq
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MRTSQQSRCATILENCGSRPSSNGLAFKTLPVASPLPIPIPISPNSNMMSLAQVNISGLR
AATDESRHRHRRLIWVFLLTACFAVMVAQITDRVRHFLSEPVSVQVRVERNSSLTYPAIT
LCNKNQFNMTAINLLKSKYGLDRLPETIIDSNFTKTKPSVKNPKEDVAKLLRIPGLNAFT
LWEKTAHAKPKMIKECWFGRNVTCDARGTWSLSLTTMGVCHTYTLNDSLIHLAGIFHNLY
LKIQELEEDHYRSDEGWKFYIHNPLELPTLGVETHGTSLYPGQGRDLRLDLKKIWALHHS
KNPCERNLAYLQNNCFFDCFMNRLHKENITCSLPYMIGSPLPYCSTPESYHNTEEIANNL
FFFGQWNPNECQCKQQCLKTLFTSSLESTTDKYSAKKQVSRARVRIYYQNLQYEFIKETV
GYGTIDLLCDIGGTLSLLMGASLLTCCELLEVAWMSLVSKCRPCRRQDKQPKEGTMDASQ
VHV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaggacctcccaacagtcacgatgtgccacgatcctcgagaattgcggttccagacca
agtagcaatggcctggcattcaagaccctacctgtcgcctcgccattaccaataccaata
cccatatcacccaattccaatatgatgagcttggctcaagtgaacatctcggggttgcga
gcagctacggatgaatccaggcatcggcaccgtcgcttgatttgggtgttcttactcacg
gcttgcttcgccgtgatggtggcccaaatcacggacagagtgcggcatttcctctccgaa
cccgtatccgttcaagtgcgagtggaaagaaacagcagtcttacttatccggccatcacc
ctttgtaacaaaaatcagttcaatatgacggccatcaatctgttgaaaagcaagtatggt
ctggaccgccttccagaaaccataatagactccaattttaccaagaccaaaccgtccgtg
aagaatccaaaagaagatgtagccaaactccttcgtataccagggctcaatgcgttcact
ctttgggagaagacagctcatgccaaacccaaaatgatcaaagagtgctggtttgggcgg
aacgtcacttgcgatgctcgtggaacgtggtccctttctttgacaacgatgggcgtgtgt
catacgtataccttgaatgatagtctaatccatttggccgggatcttccacaacttgtac
ctcaaaattcaagagctggaggaagaccattaccgaagcgatgaagggtggaaattctat
attcacaacccactggaacttcccaccttgggcgtggaaacccatgggacgtctctttat
ccaggccaagggcgggatcttaggcttgacctgaaaaaaatatgggccttacaccactcg
aaaaatccttgtgaaagaaacctggcttatctgcaaaacaattgctttttcgattgtttt
atgaaccggcttcacaaagaaaatattacttgtagtcttccatacatgataggaagtcca
ttgccttattgctcaaccccagagagctaccataacaccgaagagatcgctaataatcta
ttcttcttcggacaatggaaccccaatgaatgtcaatgtaaacagcagtgcctcaaaacg
ttgtttacttcctcgttagagtccactacagacaagtacagcgccaaaaagcaagtcagt
cgagcgcgggttcggatctactaccagaacctccagtatgaattcatcaaggagaccgtg
ggctatgggacgattgatctactttgtgacattggtggaacacttagcctcttgatggga
gcctctcttctgacgtgttgtgaacttttggaggtggcgtggatgagcttggtttcgaaa
tgccgaccttgtcgaagacaggacaagcagcccaaagagggaacaatggatgcatctcaa
gttcatgtctag
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