Tigriopus californicus (tidepool copepod): 131884121
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Entry
131884121 CDS
T09700
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1-like
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
131884121
Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
131884121
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Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_LRRK2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RSE1_2nd
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
131884121
NCBI-ProteinID:
XP_059087772
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All DBs
Position
1:complement(9745115..9747400)
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AA seq
459 aa
AA seq
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MPDKRKSDRMSAHGNQKKLKTTEDNTEVLAYEPVHFIRSHSKNNDPADIQTQIWEVVFEP
DPVNPEKTTSLVATCGGNSICIIDVNAGTVLMKYKHKDLKENFYTLAWTTLTLGEEKTNI
LVSGGIRGEIRMFHPKHRVCFHEWRPVDKKSIAVNSLVFHSEKPTWLFCGTSDGYVTLWD
VSYPTLPSYDGVNPVQLLRLFPDYGDVYNIAWTGSNRWLLAGTAAGLVGWNIEDDKVINS
NKQYKPKMVDFIMPESKRDEGENPIVDSLAVASEWNIVSKCALHGLIYVWDLKATIEGIK
KEDLKTDTSDANTDGAEDKAVIEQDVTMLARLRWSDTDNFYMNLGCHKGKGLICCGDDKG
SLWLYNQPQFGKDGATAIKDTVENSARLSWPELQDDHLENTRKVPLDRHDIIIDKVAASH
DNNHIVAVTSNNMVCIWKRTDENASSTVSGGGTGAGSEN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgccggacaaaaggaaaagtgaccgaatgtctgcccatggcaaccagaagaagctcaaa
actacagaagataacaccgaagttctagcctacgagcctgtgcatttcattcgttctcac
agcaagaacaatgatccagcagatattcaaactcagatttgggaagtcgtgttcgagcca
gacccagttaatccagaaaaaacgacctcattggtggccacatgtggtggaaactccatc
tgcatcattgatgtgaatgcaggcacagtgctcatgaaatacaaacacaaggacctgaag
gaaaacttttacacgcttgcatggacgactctgacattgggtgaagagaagaccaatatt
ctcgtatcgggagggattcgtggtgaaatccgaatgtttcatcccaagcatcgggtgtgc
ttccacgaatggcgtccagttgataagaaatccatcgccgtcaattccctcgttttccat
tccgaaaagcccacgtggctcttttgtggaactagtgacgggtacgtgacgctctgggat
gtaagttaccctaccttgccctcttacgacggcgtgaatccggtccaattactccgcttg
tttccggactacggggatgtgtacaatatcgcctggacgggtagcaatcgttggctcctc
gcgggaactgctgctggtctcgttgggtggaacattgaagacgacaaagtcattaactcg
aacaaacaatacaaacccaagatggtggatttcattatgcctgagagcaaacgtgatgaa
ggtgagaatcccatcgttgattcattggccgtggcgtccgaatggaacattgtgagcaag
tgtgccttacatggactcatctatgtttgggatctcaaggccactatcgagggtatcaag
aaagaagacctcaagactgacacgagtgatgcaaatacggacggagctgaggacaaagcc
gtgatcgaacaagacgtcaccatgttggctcgtttgcgatggtcagacaccgacaatttc
tacatgaacttgggctgtcacaaaggtaaaggcttgatttgttgcggtgatgacaaaggc
tcattatggttgtacaaccaaccgcaatttggcaaggacggagccaccgccatcaaagac
acggttgaaaattctgcccgacttagttggcccgagttgcaagacgaccacttggagaac
actcgaaaggttccactcgatcgccacgatatcatcatcgacaaagtggccgcttcccac
gacaacaaccacatcgtggccgtgacttcgaataatatggtgtgtatttggaaaagaacc
gacgaaaacgctagttccaccgtgtcggggggtggaaccggggctggatctgaaaattga
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