KEGG   Tigriopus californicus (tidepool copepod): 131884125
Entry
131884125         CDS       T09700                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    131884125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcf03019]
    131884125
   03036 Chromosome and associated proteins [BR:tcf03036]
    131884125
Messenger RNA biogenesis [BR:tcf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     131884125
Chromosome and associated proteins [BR:tcf03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     131884125
    COMPASS/SET1 complex (yeast)
     131884125
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WDR55 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_SPT8 eIF2A Cytochrom_D1 NBCH_WD40 WD_LRWD1 WD40_RFWD3 Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 131884125
NCBI-ProteinID: XP_059087773
LinkDB
Position
7:complement(5153599..5154946)
AA seq 320 aa
MHLDDDLFKRFCVAKSFKENEAKTNSMNFSWDGLNLITSSEDDQIIIFDCEKGVQKRLVN
SQKYGVAHVRFTHAKNAIVHASTKVDDDLRYLSLHDNKFIRYFKGHTKKVISLAMSPIDD
SFISGSADNSVRLWDLRAPNCQGVMHVGVGGKPVCAFDPEGLVFSVGVQSEQVKLFDLRS
YDKGPFATFVSPQEKNFEWTGIKFSPNGKYILLTTNGPFMRLLDAFEGKPLQTFAGFQNN
RGVPIDGGFSPDSRYVISGSTDGRIHIWDTESGMKVCILNGGQIGPTQCVQFNPTYFMMA
SACSHLNLWLPNTKDEPTTA
NT seq 963 nt   +upstreamnt  +downstreamnt
atgcatctggatgacgatttattcaagcgcttctgcgtggccaagtccttcaaagagaat
gaggccaagaccaactcgatgaatttctcttgggacggcctgaacttgatcacgtcctcc
gaggacgaccagatcatcattttcgattgcgaaaagggtgttcagaagcgtctggtcaat
tcgcagaaatatggcgtggcccacgtgcgattcacgcacgccaagaacgccatcgtgcac
gcctccaccaaggtggacgacgatttgcggtatctgtccttgcacgacaataagttcatc
cgatatttcaaaggccacaccaagaaggtcatttccctggccatgagtcccatcgacgac
tcgttcatttccggctcggccgacaactcggtccgattatgggacttgcgggcgcccaac
tgccaaggggtcatgcatgtgggcgtgggcggcaagcccgtgtgcgcctttgaccccgag
ggcctggtcttctccgtgggcgtccaatccgaacaggtcaaactcttcgatttgcgatcc
tatgataaaggtcctttcgccacgtttgtctccccccaagagaagaactttgaatggacg
ggtatcaaattctcgcccaatggcaagtatatcctcctcaccaccaacgggccctttatg
cggctgctcgatgcctttgaaggcaagcccttgcagacctttgccggcttccagaacaat
cggggcgtgcccattgatggtggcttctcgcccgattcgagatacgtcatctcgggctcg
accgatgggcggatccacatttgggataccgaatctggtatgaaagtgtgtatcttgaat
ggcggacaaattgggcccacgcagtgcgttcaattcaacccgacctatttcatgatggcc
tcggcctgctcccatttgaacttgtggttgcccaataccaaagacgaacccactactgct
tga

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