Tigriopus californicus (tidepool copepod): 131884167
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Entry
131884167 CDS
T09700
Name
(RefSeq) GATOR complex protein Wdr59-like
KO
K20409
SEA/GATOR complex protein SEA3/WDR59
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
131884167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131884167
Membrane trafficking [BR:
tcf04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
131884167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
zf-RING_16
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
WD40_RFWD3
Na_trans_assoc
RWD
WDR55
Chal_sti_synt_C
Motif
Other DBs
NCBI-GeneID:
131884167
NCBI-ProteinID:
XP_059087834
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All DBs
Position
7:11115252..11117955
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AA seq
1172 aa
AA seq
DB search
MAQDTASTSGASNSQDRVLSSTLSRQWSSEIISAEHIDLQATAMGLDCSGQIVLLGGKKY
LGLVKLDYETPTLEVTSKLNRPTTKWEACKISWNPDIGSKEVVGMAWNDRVELFKVQPHS
IASMDQLRFHSRVITDFDWSYEDPNVLASASLDSLVYQWDIREPSTPVLTLNGMVPITHV
RWNRHNPHHLATTHEGEVKIWDNRRLDMPTRFISMQSSRILSLDWSRNSAHKFVTSGQDC
TVKCFDLATDHKNPKKVLKTAAPVLRARYTPFGEGLATVIIPQLHRNDNTLFLWNSQHLQ
SPVHCFFGHKDVILDFDWRRLEGSDDMEMITWSRDHTLRLWQVPVALQNQCGGKGCSTKT
SVSNESDCDEKEDDDINNYEEKHDNSHPPPLEPQDSFEELDVDKTLTRSGGLELLKEEEE
QQQQLQNNLDTAFIVPSRESTPLRQLERKNSSILAQEFQSLDMSRIKYITIENLDWARRT
CRLSASFLGKITFHKIFLRITFQRDYPLSCPMFAIGRGTTLDSASKASIVDAMKMTAGQH
VRRNLICLEPCLLQLEALIDQMRKGGGGESFTSSSDILSMRNSLPGQGEALKNNTPPPNP
FPLAVDGNPEMLEGDMGNLPDSNVPYPKLSGARFCSNDLLVCFCQTDSVSKMVRSSPGNT
LILTPRALPAFETSYHLTQQLDIMNGMRPMNARSGQFRQSPSKYQSSSSNLTCNSSSSSL
VGLKHAGESGSLKTTGRFNICRVRSGSTEDVKGPLSRRPSNTAAPIKDCKIDKGSVGAKV
AVYNISDLMPFRKSLAQGYFLPHGPLQDRKRCCLENAKLAAKESYVQRATVWNICGQMMD
KIQHKSNKNEIPWAVHPLGRPLLEKMIQNLLVNWDIQTAALVVCFFKPFNPPKSRIPPAV
SVTIHQSPVVPKPLSPRRQASLMSPLNEPRGRHSRSPSWGQRANTPWYMRPGALPAHSSN
SPYHTIHISSTTTNEGASNTGLARIFGNTPTLGSQSNLEQYFSPNPRESRSNSWSEAKEE
EVEVPSPALSEEVKEDVFMEQAEVSDILDPAKSIYHDRLKLGYANVLQNWGLLIERCALL
KNLNKMPSQRHIGLEMTVNCDHCGLDSGFQAQCSYCFKFKMRCSICQLFVKGLALNCQAC
GHGGHMIHWQQWFQDQRECPTGCGCACSDQSQ
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagacacagcgtctacaagtggagcttcaaattcgcaagaccgcgtcctttcc
tccactctaagtcgacaatggagctcggaaatcatttcagccgaacatatcgaccttcag
gccacggccatgggcctggattgctctggacagatagttctcttaggaggcaagaaatat
ttgggcttggttaagcttgactacgagaccccaactttggaggttacgtcaaagttgaat
cgacccacgacgaaatgggaagcttgcaaaatcagttggaatccggatatcgggtcgaaa
gaggtggtgggaatggcttggaacgaccgggtggagttgttcaaagtgcaaccacattct
attgcctccatggatcaattgcgcttccattcccgcgttatcaccgattttgattggagc
tatgaagacccgaatgtccttgcatcggcttcgcttgacagcttggtgtatcaatgggac
attcgcgaaccatctactccagtattaaccctcaatggaatggtgccaatcacacatgtt
cgatggaacagacacaatccacatcaccttgctactacccatgagggcgaagtcaaaatc
tgggataatagacgcctcgatatgcccacacgatttatcagtatgcagtcttcccgtatc
ctcagcttggattggagccgcaattcggcccataaatttgtgaccagtggtcaagattgc
actgtcaagtgtttcgatctcgcaaccgaccacaagaatcccaaaaaagtactcaaaacc
gctgctcctgttctccgagccagatacacaccatttggagagggcttggccacagtcatt
atcccacaattgcatcgtaacgataatacattgttcttgtggaactctcaacatttacag
tcacctgttcattgtttcttcgggcataaggatgtgatccttgattttgactggcggcga
ctagaaggaagcgatgacatggaaatgattacgtggtcccgagatcacactttgaggctg
tggcaagtaccagttgctcttcaaaaccaatgcggtggaaaaggttgttcaacaaagact
tcagtctcaaacgaaagcgattgtgacgagaaagaagatgacgacatcaacaattacgag
gagaaacatgacaatagccatccaccgcccttggagccccaagattcctttgaagagctg
gatgtcgacaaaaccctcaccagatcgggtggattagaactgctcaaagaagaagaggaa
caacaacagcaattgcaaaataatctcgatactgcattcatagtaccctccagagaatcg
actccgttgcgacagctggagaggaagaattccagtattttggctcaagagttccagtct
ttagacatgagtcgcatcaaatacatcaccattgaaaacctagactgggctagacggact
tgtcgactctcggccagtttccttggcaagatcacatttcataaaatattcctcagaatc
acgtttcaacgtgattatcccctatcatgcccaatgttcgcgattggacgaggaactacc
ctggacagtgccagtaaagcttctattgtcgacgccatgaaaatgacagctggccaacat
gttcgaagaaatttgatctgtctggagccgtgtcttcttcaactagaggctttgattgat
cagatgagaaaaggcggtggaggcgagtcctttacatcatcgtcagatatcctcagcatg
cggaatagtctaccgggacaaggagaagccttaaaaaataacacgccacctccaaatcca
tttcctttggcagttgatggcaatccggagatgttagaaggtgacatgggaaatttgcca
gacagcaatgtaccctaccccaaattaagtggagctcgattttgctccaatgacttgttg
gtatgtttctgccagactgattctgtgtcaaaaatggtgaggagttcgcctggaaacacc
ttgattttgacacctcgagctttgccagccttcgaaacctcgtaccatctcacgcaacaa
ttggatataatgaatggaatgagacctatgaatgctcgaagcggccaatttagacagagt
ccaagcaaatatcagagctcttcatcgaacttgacgtgtaacagctcgtcctcgtcctta
gtgggattgaagcatgcgggtgaaagtggctccctgaagactaccggaagatttaacatt
tgtagggtcaggagtggttcgacggaagacgtcaaaggtcctttgagtcgaaggccatca
aatacagcagcacccattaaagattgtaagatagacaaaggcagtgttggagctaaagtg
gccgtatacaacatctctgatctcatgccgttcagaaaatccttggctcagggatatttt
ttaccacacgggccactccaggacaggaaacgatgctgcttagagaatgccaaattggcg
gctaaagagagctatgttcaaagagccactgtatggaacatctgtggtcagatgatggac
aagatccaacacaaatccaacaagaatgaaatcccatgggctgtgcacccgttgggtaga
cctctcttggaaaagatgatccaaaatctcctagtgaactgggacattcaaaccgctgca
ttggttgtctgcttctttaaacctttcaaccctccgaaatctcgaattcctcccgctgtc
tcggtgacaattcatcagagccctgtcgtgccaaaacccttgtcccccaggcgccaagca
tcgttgatgtccccattgaatgaaccacgtggtcgtcattccagaagcccttcttggggc
cagcgagctaatactccatggtacatgagacctggcgctttgccagctcatagttcaaac
tctccctatcatactattcatatcagttccaccactaccaatgaaggtgcgagtaatacg
ggacttgcaagaatatttggcaacactcccacattgggctctcaatccaacctagagcag
tatttctcgcctaaccctagagagagccgatccaattcttggagcgaggcaaaggaggaa
gaagtggaagttccaagcccagcattgtctgaggaagtgaaagaggacgtgttcatggaa
caagccgaggtcagcgatattttggatcccgccaagtcgatttaccatgaccgcttgaag
ttaggctacgccaacgtcttacaaaattggggcctcttgatcgagcgatgtgctctcctt
aagaacctcaacaaaatgcccagtcagagacatattggtttggagatgaccgtcaattgc
gatcattgtggcttggattccggattccaagcccaatgctcatattgtttcaagttcaaa
atgaggtgttccatatgtcaattatttgtcaaaggacttgccctcaattgtcaagcttgt
ggccatggtgggcatatgatacattggcaacaatggtttcaagaccaacgtgaatgccca
actggatgcgggtgtgcgtgttcagatcaatcacaataa
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