Tigriopus californicus (tidepool copepod): 131884199
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Entry
131884199 CDS
T09700
Name
(RefSeq) glutamate receptor ionotropic, kainate 1-like
KO
K05313
glutamate receptor, ionotropic, invertebrate
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131884199
Ion channels [BR:
tcf04040
]
Ligand-gated channels
Glutamate (ionotropic)
131884199
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
PRC2_EED_ins
Motif
Other DBs
NCBI-GeneID:
131884199
NCBI-ProteinID:
XP_059087878
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All DBs
Position
7:15978867..15989891
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AA seq
1181 aa
AA seq
DB search
MCGFKGCSGAVRCQIMAFNLPLWILVLLTIPRSMVTNAIKATTPGRKTNGCALLPNQHSQ
SGFNRYQQRKMELRVGVIYTQEEFAQGFRKQAFVAASRLLNQNSDDFCLQLDDILVQNLS
SFHLSKSVCSSLETNGYHALIGPNSEELSPHAKSICNAIDIPYLEMVPDSSSRLMIRDSG
QFSLNAHPKLEDIHAALRDFLVFANWTRVALVYTEETAKRSLLLQDLLLSQGFQCLSLRI
SLNMDRNVIQLLKQKDFHNVLIDIPDPDIYLPKFFQVCHDIGWYGEGRNFFLSTLEFNEL
TTPNPPKVFNKHYNKVYPHWKSFSFFRIHNRDLPGSMDFADAMSAMHLLQRQRLLRSRNH
DERGHKTHNREQSDEEAFPFITKVKQDKRVPYWTNGEGSKFGTFSGNNNNNNNSINNNDN
KSSAGASSSITNQSTESSSPSTIIFEAVDIGNHVAYEAAIIYDSLLILLNTVQALNYQYA
PLLLLLTPEHQSVPSHHNHNEDPLGRKVGANAHYRQGPDAYDGDDDGEGAATRHPESEPQ
RNRPPGNDKVSCKSEKPWLYGPTFYNYLNAVQVEGMTGKLSFKGGRRSSLNLELMRYSRH
NEVISKIGHWSTTTGLSVLNRSLIQTNESDEVILTVVTREERPYVMINKSLKGNDAFDGF
AIDLLKAISDVVGFKFRLYTVPDNLYGVYNHETAEWNGIVRQLTDKRADLAVASMTINYA
RETVIDFTKPFMNLGISILFKAPKDPATELFSFMNPLALEIWLYMLLAYILVSITIWIVA
RFSPYEWAHPHPCIDTGLVFQNDFTLPNSFWFAIGTLMQQGSDLNPKAASTRIVGGIWWF
FTLIIISSYTANLAAFLTVERMATPIESAEDLADQSDIKYGTLVGGSTMTFFRDSKIETY
QKMWRYMESNDPDTFTHSYEEGVERVLRGNYAFLCESTMLDYLLQRNCNLTQIGGLLDNK
GYGIATPIGSKWKDKISQAVLFLQEKGVIQMYYDKWWKNHGPQAGRECKKKKLNDQAQAN
ALGVVNIGGIFVVLLCGLAFAVIVAIIEFCWRTKHHRHKQRSEGVGTTSFGGGARRGRRT
SGSGFGGDVPSTRVTGVSGHGQSLFMEMLHNLAPFLFGTNDSKDHPPNEADELGHEFGPS
GGGHLTVNHQDRPHSQNNRDLQYIEQSRLTTCSLIREQNNL
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggcttcaaaggatgctcaggggctgttaggtgccaaattatggccttcaatctc
ccgctatggattctcgtacttctcaccatcccgagatccatggtgaccaacgccatcaaa
gccaccacaccaggaagaaaaaccaatggctgtgccttactccccaatcaacacagtcaa
agtggcttcaatcgatatcaacaacgaaaaatggagctgcgtgtaggcgtgatttatact
caggaggaattcgctcaaggatttcgaaaacaggcgtttgtggcggcctcgcggctgtta
aatcagaactctgacgatttctgtctgcagctcgacgatatcctcgttcaaaacttaagc
agcttccatctctcgaaatctgtttgctctagccttgagaccaatggatatcatgctctc
attggaccaaatagcgaggaactcagccctcatgccaaatccatctgcaacgccattgat
attccctacttggaaatggttccggatagctcaagtcgtctaatgattcgtgacagtgga
caattctcgctcaatgctcatcccaagctggaagatattcatgctgctctccgagatttc
ctcgtctttgctaattggacccgagtggcccttgtgtataccgaggagactgccaagcga
tccctattgctccaagacttgcttctgagtcagggctttcagtgtttgagtctgcgaatt
tcgctgaatatggacaggaacgtcatccagctcttgaaacaaaaggactttcataatgtc
ctcatcgacatccccgatcctgacatctatttgcccaaattcttccaagtgtgccacgat
attggctggtatggcgaaggtcggaacttcttcttgagcaccttggaattcaatgagctc
actacacccaatccacccaaagtgttcaacaagcactacaacaaagtatatcctcactgg
aagagcttttccttcttccggatccacaaccgcgatctacccggatctatggactttgca
gatgccatgagtgccatgcatctgctccaaaggcaacgcctgcttcgaagccggaaccac
gacgaaagaggacacaagacacataacagagagcaatcagatgaggaggcctttccattc
ataacaaaagtgaagcaagataagcgcgttccctattggaccaacggtgagggaagcaaa
ttcgggacctttagcggtaacaacaacaacaacaacaacagcatcaacaacaacgacaac
aaaagcagtgctggggcttcatcctcgattacgaaccaatctaccgaatcaagctcgcct
tccacgataatcttcgaggcagtcgacatcggaaatcatgtggcatacgaagctgcgatc
atctacgatagcctgcttatacttttgaacacggtccaagcgctgaactaccaatacgcg
cctctgctcctccttctcacccccgaacaccagtcggtgcccagtcatcataaccataat
gaggatcctttggggcggaaggtcggcgctaatgctcactatcgccaaggtcccgatgcc
tatgatggtgatgatgatggtgaaggggccgctaccagacacccggagagcgaaccacaa
cggaacaggccccccggcaatgacaaggtgtcgtgcaagagcgaaaagccgtggctttat
gggcccacattttacaattatctaaatgctgttcaggtggaaggaatgacgggcaagctt
tcattcaagggagggcgaagatccagtttgaatttggaactgatgcgatattcccgtcac
aacgaggtcatctcgaaaatcggtcattggtccacgaccactggcctctccgtcctaaat
aggtcattaatccagaccaacgaaagcgatgaggtcatcttgaccgtcgtcacccgagaa
gagcgaccttatgtcatgatcaacaagtctttaaaaggcaatgatgcattcgatggcttc
gctatcgatttactcaaggccatttcagatgtggttggattcaaattccgactctacacc
gtgcctgataatctttatggggtgtacaatcatgaaacggccgagtggaatggaatcgtc
cgacagttaacagataagcgagcggacttggcggtggcctccatgaccatcaactatgct
cgagaaacggtgatagacttcacgaagccattcatgaatctaggcatcagtattctcttt
aaggcgcctaaagacccggccacggaattattctctttcatgaacccattggcactggaa
atttggctctacatgctcttggcctacatcctcgtgtctatcaccatctggattgtggct
cgattctcgccatacgaatgggctcaccctcatccttgcatcgatacggggctcgtcttc
cagaatgatttcacccttcccaatagtttctggtttgccatcggaactctcatgcaacaa
ggatccgacttgaacccgaaagcggcttccacacggattgtgggcggcatctggtggttc
ttcacactcatcattatctcatcgtacacggccaatctggcagccttcctcaccgtggag
cgaatggccacgcccatcgaatcggccgaggatctagctgatcagagtgatatcaagtat
ggcacactggtggggggatccaccatgactttctttcgggattccaaaatcgagacatat
caaaagatgtggcgttacatggagagcaatgatcctgacacgttcacccattcctatgaa
gagggcgtggaacgcgtgctgagaggaaactacgcgtttttgtgcgagtccactatgctg
gactatcttttgcaacggaattgcaatctcacacaaatcggaggactcctagacaacaaa
ggctatggaatcgcaacgcccatcgggtccaagtggaaagataagatatctcaggccgtc
cttttccttcaagaaaaaggtgtgatacaaatgtactacgataaatggtggaagaaccac
ggacctcaagctggtcgcgagtgcaagaagaagaaattgaacgatcaagcgcaagccaat
gcattgggtgtggtcaacatcggaggcatctttgtcgtgcttctctgtggtctagctttc
gctgtgatagtggctataatcgaattttgttggagaaccaaacaccatcgtcacaaacag
cgatcagagggcgttggaacaacgtcatttggaggaggtgcgagacgaggacgaaggacc
tctggatcgggatttggcggtgacgtaccctcgacacgtgtaactggtgtgagtggccac
ggacagagcctcttcatggagatgcttcacaatttggcacccttcctttttggcacgaac
gattccaaggaccatccacctaatgaggccgacgaacttggacatgaatttggcccgagt
ggagggggacatctgaccgtcaatcaccaggatcgcccccacagccagaacaatcgtgac
ctacaatacatcgagcagtcacggctgaccacgtgctcattgataagggagcagaataac
ttgtga
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