Tigriopus californicus (tidepool copepod): 131884220
Help
Entry
131884220 CDS
T09700
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial-like
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tcf03029
]
131884220
Enzymes [BR:
tcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131884220
Mitochondrial biogenesis [BR:
tcf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
131884220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
131884220
NCBI-ProteinID:
XP_059087904
LinkDB
All DBs
Position
7:complement(6778641..6782337)
Genome browser
AA seq
1176 aa
AA seq
DB search
MWRWVSPNWASLRGPLGVIWQQRSVTSLGVSKACSSPACPLVGGMSSSKSSRGGSQTTVD
LEQTVRRELTLLKAAQQRPTIKRTQTLGRQVDALTEASPNSLESHLLKEGLSLATMSQFL
VLKDTWSQLVQSHLTVVHSSQDLDRVLIMIQRYRTKWKAMVQASNKTVLFDQPLYIRLLK
LTALNGSWKHVHVIHDYLKQDWGGLNPSSGAAIAECVARISPTKKYLNYVLSLQAELAEL
DAQSVFQASNYATKVGQGLQIANPRFQPQPRPTYQPRRYESSILSALNERDDSALQSQMS
DIEYASQIQKLSRRQFKMELSGHQIIPSVLAVPVDRKVNKLVKDLLNQWSSSLEQTIESS
YANPSQTPPSNPMSAPFLSNISAPDLSQIILDVVVYLCKTSEHFSPPTKHLEDMLGTAVM
IRSRMNELQKVHPESLVSQIEMLSKVYARYMTWFIRPQDQLCHREAFEAIIHEWNADDLT
LGSFKWAPQVRLAVGQELLNAIVHKLTINLDAGSNLCLNNRSFKIIGTNVKSRTQLGETK
TFQAFYKVLRTRGKGRELEEVKPHPVLTSLFAIGKLSDLSFPVTELPMVVPPRPWVSDSS
GGYLLHEVEMTRRPVEEAVETPRSPNTLLPTLDALNQLGSTPWIINKPILECIVEVFRHP
KKYNAYLKRVGIPRHPENIEPPSEAMSKARFRDMTRDQYTAFQQGQAQRQAYIQLKAESY
SLWCDTLYRLSIAQHFQDRVLYFPHNIDFRGRVYPIPPYLNHMGCDLSRSLLVFAEGKPL
GPKGLDWLKLHTVNLSGFKKKSSIRERMQYAEDNLSLFLDSASDPFGGKKWWLESEEPWQ
TLGACIELRNALSSSDPTNYISHLPIHQDGSCNGLQHYAAMGRDSLGAKFVNLIPSECPQ
DVYGEIASILERKRSEDAQAGNPIAILLNGAIQRKVIKQTVMTTVYGVTKYGAKLQIAKQ
LKDIENPIIPSDKLGEASVYLAHRTFDSLNEMFESSQKIQNWFISCADMISTDFFRFVEW
ETPLGLACVQSYQKPLHSKNLPLGLRSLARKPNTSKQRNGFPPNFVHSLDSSHMMLTALH
MWRRGCTYASVHDCFWTHPATVEIMNEVCRQQFINLHSYPILEELSEAFLQNYIKEDTKQ
KLDPVQLAKAEQTFRAVPKKGDLDLAVVKHSTFFFS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgctgggtttcgcccaattgggccagtctacggggtcctttgggtgtgatctgg
caacaaaggagtgtgacgagtttaggcgtatctaaggcctgttcgtctccagcctgcccg
ctggtagggggcatgtcgtcttccaagagctccagaggagggtcccagactaccgtagac
ttggaacagaccgtgcggcgcgaactgacgttactcaaagcagctcaacagagacccact
attaaacgcacccagacccttgggcgccaagttgatgccttgactgaggccagtcccaat
tcgctggagtcccatctactcaaagaaggcttgtctttggctaccatgagccaattcttg
gtgctcaaagacacatggtcccaattggtccagtcccatctgacggtggttcattcgagt
caagatttagaccgcgtcctcatcatgatccagcggtatcggaccaagtggaaggccatg
gttcaagcctcgaacaagaccgtgctctttgatcaacctctttatatccgattactcaag
ctcaccgctcttaatgggagttggaagcacgttcatgtcattcacgactatctgaagcaa
gattggggaggattgaacccatcgagcggtgctgccatcgcagaatgtgtggctcgaatc
tcgccaaccaagaaatatctcaattacgtcttgtccttgcaagccgaattggccgaattg
gatgcccagtcagttttccaagcttcaaattatgccacgaaagtgggccagggccttcaa
attgcgaatccaagatttcaacctcagcctcggccgacttaccaacctcgacgttatgag
tcgtccattttgtccgctttgaatgaacgtgacgattccgcattgcaatcccaaatgtcc
gatatcgagtacgcctctcagatccagaagttatctcgccgccaatttaaaatggaattg
tcaggccaccaaatcatcccttcagtgttggctgttcccgtcgatcggaaagtgaacaaa
ttagtcaaggatctcttaaaccagtggtccagttcgttagagcaaactatcgagtcaagc
tacgccaatccgtcccagaccccgccatccaaccccatgtctgctccgttcttgagcaat
atttccgccccagacctctctcaaatcattcttgatgtggtcgtgtatctttgcaaaaca
tctgagcactttagtcctcctaccaaacatctagaggatatgctgggcacggccgttatg
attcgatcaaggatgaatgaactgcagaaagtccatcctgaatctttagtcagtcagatt
gaaatgctttcgaaagtgtacgcccgatacatgacgtggttcatccgtcctcaagatcaa
ttgtgtcatcgagaggcttttgaagctatcatccatgaatggaatgctgatgacctgacc
ttgggctcctttaaatgggcaccccaagttcgattggcggtgggccaggagctattgaat
gcgattgtgcacaagctgacgattaatttggatgctggttccaacttgtgtttgaacaat
cgatcattcaagattatcgggaccaatgtgaaatcacgcactcaactaggtgaaaccaag
acgttccaagcgttttacaaagttctccgaactcgaggcaaaggccgtgagctcgaggaa
gtaaagcctcatcctgtgcttacatcacttttcgctattggaaagctttccgacttgtca
tttcccgtcaccgaactaccaatggtggtgccaccccgaccttgggtgtctgattcgtcc
ggagggtatttgcttcacgaagtagaaatgacgcgaagaccagttgaagaagcagttgag
acccctcgatcgcccaatacattgctgcccactctggatgctctcaatcagttggggtcc
accccttggatcattaacaaacccatcctagagtgtattgtcgaggtatttcgtcaccca
aagaagtataacgcatatttgaagcgtgttggcattcctcgccatcccgagaatatcgag
cccccctcagaagcaatgtccaaggccagattccgtgatatgactcgcgatcaatacacg
gcttttcaacaaggtcaggcccaacgacaggcgtacattcagttgaaagccgagagttac
tccttatggtgtgatacgttatatcggttatccattgcccaacatttccaagatcgagtg
ctatatttccctcacaacattgattttcgtggtcgtgtttatcccatccctccgtatctt
aaccacatgggctgcgacctgtctcgatctcttctcgtttttgccgaaggcaaaccgtta
ggtcccaagggcttggattggctgaaactgcacacggtaaatctctccggatttaaaaag
aagagctcaatcagagagcgtatgcaatacgccgaggataatttgtcactgtttcttgat
tctgcctctgatccttttggcggcaagaagtggtggctggagtcagaagagccttggcaa
actctgggcgcttgtatagagcttcgaaatgctctatcaagctcggatccgaccaactat
atctcccatctacccattcatcaagatggttcgtgcaatgggttgcagcattatgccgcc
atgggacgcgactccttgggtgccaagtttgtcaatttaatcccttccgaatgcccgcaa
gatgtgtatggagaaattgcatccattttggagcgcaaacggagtgaagatgctcaagct
ggtaatccgatcgccatcctcttgaatggagctatccaaagaaaagtgataaagcagacc
gtcatgaccaccgtgtacggcgtgaccaagtatggggccaagctccagattgccaagcag
ttgaaagatattgagaacccgataattccaagcgacaaattgggcgaggcctcggtctat
ttggcccatcggacattcgactcactcaacgagatgttcgaatcgtcgcaaaagatccag
aactggttcatcagttgcgctgatatgatctcgacggactttttccgcttcgtggaatgg
gaaacgcccttgggattggcgtgtgtgcaatcataccagaagccgttacactcaaagaat
ctccctctaggacttcgatctttggcccgcaaacccaacacgtccaagcaaaggaatggc
tttccgcccaatttcgtgcattccctcgactcgagccatatgatgcttactgccttgcac
atgtggcgtcggggatgcacctatgccagtgttcatgattgtttttggactcatcccgcc
actgtagagattatgaatgaggtgtgtcggcaacaattcatcaatttgcactcttatccg
atcctcgaagagctctcggaagccttccttcagaactacatcaaagaagacacaaaacag
aagcttgatccggttcaattggccaaggctgagcagactttcagggcggtgcccaagaag
ggcgatctagacctagccgtggtgaaacattcaacgtttttcttcagttaa
DBGET
integrated database retrieval system
