KEGG   Tigriopus californicus (tidepool copepod): 131884239
Entry
131884239         CDS       T09700                                 
Name
(RefSeq) ras-related protein ORAB-1
  KO
K07874  Ras-related protein Rab-1A
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    131884239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tcf04131]
    131884239
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tcf04147]
    131884239
   04031 GTP-binding proteins [BR:tcf04031]
    131884239
Membrane trafficking [BR:tcf04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    131884239
 Autophagy
  Other autophagy associated proteins
    131884239
Exosome [BR:tcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   131884239
  Exosomal proteins of other body fluids (saliva and urine)
   131884239
  Exosomal proteins of colorectal cancer cells
   131884239
GTP-binding proteins [BR:tcf04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    131884239
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB FeoB_N AAA ABC_tran PduV-EutP AAA_7 AAA_22 AAA_16 AAA_29 LANC_like Septin AAA_5 CRAL_TRIO_2
Other DBs
NCBI-GeneID: 131884239
NCBI-ProteinID: XP_059087936
LinkDB
Position
7:complement(5911804..5914989)
AA seq 204 aa
MSTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
LVGNKCDLTTKKVVDYTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRVGPPA
PSGATGQVKIDSTPVQAKSGSGCC
NT seq 615 nt   +upstreamnt  +downstreamnt
atgtccaccatgaatcccgaatatgattacttgttcaagttgctcttgattggcgattcg
ggcgtgggcaaatcttgcctgttgctccggtttgccgatgacacgtataccgagtcctat
atttccaccatcggcgtggacttcaaaatccgcaccatcgagttggacggcaagaccatc
aagttgcaaatttgggataccgccggccaagagcgtttccggaccatcacctccagttat
tatcgaggagcccatggtatcattgtggtatacgacgtgaccgaccaggaatcgttcaac
aacgtcaagcagtggcttcaagagatcgatcgatatgcatcagagaatgtgaacaaattg
ctcgtgggcaataagtgtgatctgaccacaaagaaagtcgtcgactacacgaccgctaag
gaatacgctgaccagttggggataccgtttttggagacgtccgccaagaacgccaccaat
gtggagcaagccttcatgaccatggctgctgaaatcaagaaccgcgttggccctcccgcg
ccttcaggcgccacgggacaggtcaagatcgactcgactcccgtgcaagccaagtcggga
tccggatgttgctaa

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