Tigriopus californicus (tidepool copepod): 131884371
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Entry
131884371 CDS
T09700
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00061
Fatty acid biosynthesis
tcf00071
Fatty acid degradation
tcf01100
Metabolic pathways
tcf01212
Fatty acid metabolism
tcf04146
Peroxisome
Module
tcf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
131884371
00071 Fatty acid degradation
131884371
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131884371
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tcf01004
]
131884371
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131884371
Enzymes [BR:
tcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
131884371
Lipid biosynthesis proteins [BR:
tcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131884371
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of breast milk
131884371
Exosomal proteins of breast cancer cells
131884371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
131884371
NCBI-ProteinID:
XP_059088106
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All DBs
Position
7:complement(15939254..15943366)
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AA seq
758 aa
AA seq
DB search
MSSGGRGRGQGVGDEASVARGGYWALRPPPHPVLDQLSDTMENLMEDPSSLAATIGVGLI
QTVVFMYDFLTYPLYYAVQAPWQRVRAGQRVRAHIAHRSEAEIHVRPVEKTCPSLEVFQR
AGIRTMLECFEFAVASHSHKRMVGTRKLIRETDEEQPNGKMFKKWEMGDYEWKSYVEVDQ
ISSQFGKGLREMGLRPRDNIAIFAETKAEWLMCAMGCFKHNFPLVTLYANLGEEAISHGL
NQTEVTHVITTHDLLPKFKHVLAQTPTVQCVIFMEDQLHPTDRSGYKSGVEIVSFTEVCQ
KGRHSTAQGSRPTQDDPAIIMYTSGSTGVPKGVILPHEALITTIKAFHFVVEPPRDNDIY
LGYLPLAHILEITSEMTMFVQGIPVGYSSPNTMIDASTKIKKGDRGDCSVLSPSLMCAVP
LVIDRIYKGIHAKINAKGVFFKKLMDFFFRYKSYYHQKGLRTPILDAVVFKKFRALVGGR
IRLMLSGGAPLAPDTHDMVRNAFSLPLVGGYGLTETCACATIMDSDELSTGRVGPPLQGV
ELKLINWEEGNYTVKDTPRPRGEIVIGGGNVATGYYKMEEKTKEEFYKDENGRRWFKTGD
IGEYWDDGTLKIVDRKKDLVKLQYGEYVSLGKVESILKTCPLVENICIYGESSETFCVAI
LVPDRNKVTTLAESLDLDVSGEFENLCQDKKLVNEILKQICTHGKKAGLERFELPGALTL
TSELWTPESGLVTAAFKLRRKPIKDYYQKELKEMYSHQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtggtgggcgtgggcggggacaaggcgtgggcgatgaggccagtgtggcccgg
ggcgggtattgggccttgcgcccgccgccccatccggtcttggaccaactcagcgacacc
atggagaacttgatggaggacccgtcctcgttggccgccaccatcggcgtgggcctcatt
cagaccgtggtgttcatgtacgactttctcacctacccgctctactacgccgtgcaagcc
ccgtggcaacgggtgcgggccgggcaacgcgtgcgggcccacatcgcccaccgctccgag
gccgagatccacgtgcgacccgtggaaaagacctgcccctcgttggaggtgtttcaacgg
gccgggatccgcaccatgttggagtgcttcgagttcgccgtggccagccattcgcacaag
cgcatggtgggcacgcgcaaactcatccgggaaaccgacgaggagcagcccaacggcaag
atgttcaaaaagtgggaaatgggcgactacgagtggaagtcctacgtggaggtggatcag
atctcgtcccagttcggcaaaggcttgcgcgagatgggcttgcggccccgcgacaacatc
gccatcttcgccgaaaccaaagccgagtggctcatgtgcgccatgggctgctttaagcac
aacttccccctggtcacgttgtacgccaatttgggcgaggaagccatctcgcacggtctc
aaccagaccgaggtgacccacgtcatcaccacccacgacctcctgcccaagttcaagcac
gtgttggcccaaacgcccaccgtccaatgtgtcatcttcatggaggaccaactccacccc
acggaccgctccggctacaagtccggcgtcgagattgtcagcttcaccgaggtctgtcag
aagggccgccattccacggcccagggttcgcgacccacccaggacgatccggccattatt
atgtacaccagcggctcgaccggcgtgcccaagggcgtcattctgccgcacgaggctctc
atcaccaccatcaaggcgttccactttgtggtcgagccgccgcgggacaacgacatctat
ctgggctacttgccgttggcccacatcctggagatcacgtcggagatgaccatgttcgtg
cagggtatccccgtggggtattcctcgcccaacaccatgatcgacgcctccaccaagatc
aagaagggcgaccgaggcgattgctcggtcctgtcgccctccctcatgtgcgccgtgccg
ctcgtgattgaccgcatttacaagggcattcacgccaagatcaatgccaagggcgtgttc
ttcaagaagctcatggatttcttcttccgatacaagtcctactatcatcagaagggtctc
cgcacgcccattttggatgccgtggtgtttaagaagttccgtgcgctagtcggcgggcgg
atccgtttgatgttgtcgggtggcgcccccctagcccccgatacacacgacatggtccgc
aacgccttctctttgccgctagtgggcgggtacgggctgaccgaaacctgcgcgtgcgct
acaatcatggacagtgacgaattatccaccggccgagtcggaccgcctcttcaaggcgtg
gaactcaaactcatcaattgggaagagggaaactacacggttaaagacacaccccgccct
cgaggcgaaatcgtgattggcggaggcaacgtggccacaggttactacaaaatggaggag
aagacgaaagaggagttctacaaggatgagaatggacggcgttggttcaagaccggtgac
attggcgagtattgggatgatggcaccctcaaaattgtggaccgcaagaaagacttggtc
aagttgcaatacggcgagtacgtgtccctgggcaaggttgagtccattctcaagacctgt
cccctagtcgaaaatatctgcatctatggcgaatcctcggagaccttctgcgtggccatc
cttgtccccgaccgaaacaaggtcaccacattggccgaatcgctcgatttggacgtgtcc
ggcgaatttgagaatctttgtcaggacaagaagctagtgaatgagatcctcaagcagatc
tgcacccacggtaagaaggcgggtctggagcgatttgagctgcccggagcgctcacattg
acctcggagctttggacacccgagagcggtctggtcacggcggccttcaagttgcgtcgc
aagcccatcaaggactactaccagaaggaactcaaggagatgtacagtcatcaatag
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