Tigriopus californicus (tidepool copepod): 131884426
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Entry
131884426 CDS
T09700
Name
(RefSeq) transformation/transcription domain-associated protein-like
KO
K08874
transformation/transcription domain-associated protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131884426
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tcf01001
]
131884426
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131884426
03036 Chromosome and associated proteins [BR:
tcf03036
]
131884426
Protein kinases [BR:
tcf01001
]
Serine/threonine kinases: Other
PIKK family [OT]
131884426
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
131884426
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
131884426
STAGA complex
131884426
TFTC complex
131884426
TIP60 complex
131884426
SAGA complex
131884426
SLIK complex
131884426
NuA4 complex
131884426
Chromatin remodeling factors
ASTRA complex
131884426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tra1_ring
FAT
PI3_PI4_kinase
Tra1_central
FATC
EFR3_ARM
PAP_central
TPR_21
Motif
Other DBs
NCBI-GeneID:
131884426
NCBI-ProteinID:
XP_059088182
LinkDB
All DBs
Position
8:complement(1011257..1021084)
Genome browser
AA seq
3100 aa
AA seq
DB search
MKIEITYHRGLIGSDLLMAALNGSQTLVSQGLRTLELCVDNLQPDFLYEHIQPVRAELMQ
ALWRTLRNPSDQIAHVAFRVLGKFGGGNRKMMIEPQALTYTETENPGPCITIHFPEYKQS
IAMPVKKVIETAFNALKSSSTEPGFYRKQCWEVLKCYLVSSLKMDEDKATMLKLLSHTSF
REGAIPSIAGPNYKCTDTQARQVHQMALTGMFVAAAIKELRQSVLPTMVALVRHYTMVAI
AQQSGPFPMSAKQSKLNGMDPLVLIDSLAVIMGHEEKELCKPGHLAMVLILDTATNIMGS
KERACRLPLMEYMSDRMCNLCYERAWYAKLGGCIAIKFLFERMEIRWVFLHQFHFLKALL
FIMMDLTDEVSSGAVDMAKSNLEKMLTLCAKPVQIPEGVTEEDPRIVELRTIQEKSLRDV
INELVRQVTSPNTCVRERAMDSLKLLAEIQGKGITEVMDPHKDVLQDMIPPRKHLLRHQP
VNAQIGLMEGNTFCTTLNPRLFTIDLKIMEHKVFFTELLSLCEADDQSLQKLPCYKSISN
LVPLRKSALKALAACHYIPECRDKIFNVIYSKALNSTNNDLVEAGYECMKKFISGFEVDI
KLVTELTKPIISNLADYRNLTQNIIARLCFLAELFPKVFNEKLCEQLLQLLKKWLEISIV
AHKQMQQGISKTSWLPQLKVAAAIVRLFQKIPPSHPPQKIIEMLCKLILTTERNLLIEPG
SILREPLIGYLIKYPSETVEYFTNDITAKDPQNGRFIEFIMKHQEGKVFREALKLKIGKL
IGMIMGTNQLPTPIQQQNQPQITPKERADIQLVCIRMVWVMVKHDREWIKDQQSLVDALK
RVWNQDAYHDKYTKGDTVDYSQWKGPKVLVKIMLEYFKLHQNTEILLLFQLLRALVGRYI
ADFQFLKDFLENEVCQVYSTQWKRAAFFEFVRLWNLAESNLSQDLKGKILQFIIIPCFSL
SFEQGEGDSLIGSPPSPDQDNPENVVSTFINSIIDPESPFGTSDTVRILLLQFSCLLVDR
GAAHIHDASNKKQGNKLRRLMTYAWPCLLSKNCVDPATRYHGHLLLSHIIAKFAIHKRIV
LQVFHSLLKAHAVEARTVVRQALEILTPSMPGRMEDGNTMLTHWTKKIIVEDGHTGSQLV
HILQLVVKHFKVYYPVRHHLIQHIVSSIQRLGFTATATIEQKKLAVDLCEIVINWEKHRV
KEESEANADSSSSASTGSGTGASNAPTTNPAGGEVVVGGVKRSASTDIGPEMKRKMPGLA
QVKTVTMGATGATAHVTTTASNSREDPNKPLNKAHCDAIVNYLLRLACQVSDAQAGTGGS
PGEMLSRRCVALLKTALKVEVWPNCDLKLGAFEKILAGPQGVDSNQPNYVNICTCLDILS
FLLSILRKDQVLTAFKPLQKAISTCMNCPNAKVIRAVHSLMSRLMNLFPTEPTSSNVASK
HEELEQLYAMVSRVIYEGLTNYEKNSQAATSSLFGTLMMLKAACINNSCYIDRLITSFMR
VLLRMFKEHLNPPNNEGTAAASELLILSLDLVKNRVAVMGIDMRKSFIGQILVGLIERSP
DVKVMKAITKMLEDWMKIKDVKLINQGPSLKEKSILLVKMMQYVEKRFPDDAELNAQFLE
LVNFVYREDAFKNSELTSKLEGAFLAGLRCTQPHIRAKFFEVFDNSMKKRLHERLMYIIC
SQNWESMGPHYWIKQCIELLLSIAVAGLPINNCTPTSRLPTMTTVIALAEPGDRNAFDVL
SSIKEEPTDVETVEAHDKEEELTTEMDLANHADSTLKKEGLTNHTTSLNQLISRQYKFLE
SIGEVKTIHFLNATAQLAHMDNGLAEYIWLNLLPRIWKILADRQRETLAAEVVTFICSGI
HVVQKDCQPSAMNTFYEALTLCQPTIGIKPAVLKYLGKSHNLWHRAALQLEHLSFEAVPP
ANVIKTRKDPVEQFDFEPVISLTPQQEAMDALAEMYALLREEDLGAGLWQKKAQYQETNI
AIAYEQQGYFEQAQGAYELAMTKYRNDHTTQPSSIKIQQEVRLWEEHWIRSSKELNQWET
LLDYGNTQGVSNPLLVLESAWRNNPNWTLMKDSLTQVETGYPKEMGWKVNLYKGYLAICN
TEDAHLPMVERYVEQASTLCMKEWRRLPHVVSHIHLPYLQAAQQVMELQEAAQIHQGLLH
ARQNSLHDMKAIVKTWRNRLPVISDDLSHWSEIFTWRQHHYQFIANHYNNEQVDQASNHS
MLGVHASAQAIIHFGKIARKHNLTSVCLESLSRIYTIPSVPIVDCFQKIRQQVKCYVQTA
VALGKNELQEGLEVIESTNLKYFTKEMTAEFYALKGMLLAQIGRSEDANKAFSAAVQMHD
TLVKAWALWGDYLESIFTKEMTNGQPRTIKFGVEAITCFLHACRHQNESKSRKYLAKVLW
LLTYDDENLELASAVEKYNIGVPPIQWLPWIPQLLTCLVRSEGKLVLNLLSTVGRMFPQA
VYFPIRTLYLTLKIEQRERVKTTGDQGQSITERRSSDSPSQAQDQAGGPQGGQESGPIRA
TASMWRCSRIMHMQRDLHPTVLSSLEGIVDQMVWFRENWYEEVLRQLRQGLAKCYLIAFD
NRTTVSDAHITPHTLNFVKKLVSTFGIGIENISSSVNSSYNSAASESLVRRAQASAQDPV
FQKMKSEFTSNFDFTVPGAMKLQNLIQKLKKWIKILEAKVRVLPKSFLIEERCRFLSNFS
RQTAEVELPGELLLPKHSHYQVYIQRFMPKVETVQKHNSAARRLYIRGHNGKIYPYLVVN
DSGLADARREERVLQLLRMMNHLLGKHKETSRRFLNFTVPRVVAVSPQMRLVEDNPHSVS
LLDIYKDRCFKRGLEHDNPIAKYYERLATVQAKGSQASHQVLRDILSEVQRSMVPKSLLK
EWALVTFQSSTDYWTFRKVFTLQLALSAFAEYVLHLSRLNPDMMYIHQDSGLVNISYFKF
DVDDVNGDLDSNRPVPFRLTPNIYEFLTEIGVRGPLTASMISAARCFVHPNFKIQAILRA
ILRDEMIAFNKKTDAGSNGGSVSGAASGGTAATGPNEANTDMRDRELVITMVTKAVNAIT
QRLSSLSVFDGTDSKVGTLVAAANSHDNLCRMDPAWHPWL
NT seq
9303 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgagataacatatcacaggggattaattggcagcgacttattgatggcggcc
ttgaacggatcccagaccctcgtgagccagggcttgcgcactctggaattgtgcgtggat
aacctccagccggatttcctgtacgagcacatccaacccgttcgtgcagaactgatgcaa
gcgctttggcggactctccgcaacccgtcggaccagattgcccatgtcgctttccgagta
ctaggcaaatttggtggcgggaatcgcaagatgatgatcgaaccccaagccttgacctac
accgagaccgagaaccccgggccttgcatcacgatccacttccccgagtacaagcagagc
atcgccatgcccgtcaagaaggtcattgaaacggccttcaacgcgctcaagtcctccagc
actgagccgggtttctatcgcaagcaatgttgggaggtgctcaaatgttatctcgtgtcc
tcgctcaaaatggacgaagacaaagccaccatgctcaagctcctgtcccacacgtcattc
cgcgaaggcgccatcccatccattgcggggcccaactacaagtgcacggacacccaggct
cgacaagtccaccaaatggccctcacgggcatgttcgtggctgccgccatcaaggaactc
cgccaatccgtgctgcccaccatggtggccttggttcgtcactacaccatggtagccatc
gcccaacagtccgggcctttcccaatgtcggccaagcaatcaaagctgaacggcatggac
ccgttggtgctcatcgactctctggccgtgatcatgggccacgaagagaaagagctttgc
aaaccgggccatctagccatggtgctcattttggacacggccaccaatatcatgggaagc
aaagaacgagcttgccgtctacctctcatggagtatatgtccgatcggatgtgcaatctg
tgctatgagcgagcttggtatgccaaattgggcggatgcatcgcgatcaaattcctattc
gagcgcatggagatccgttgggtgtttctccatcagttccacttcctcaaggctctgctc
ttcatcatgatggatctgacggatgaggtctcctcgggagccgtggacatggccaagtcc
aacctggagaagatgctcaccttgtgtgccaaacctgttcaaatcccggagggtgtcacc
gaggaggatccgcgcatcgtggaattgcgcaccatccaagagaagtctctacgggatgtg
atcaatgagctggtccgtcaggtgaccagtcctaacacatgtgttcgagagcgagccatg
gatagcttgaagctgttggccgagattcaagggaaaggcatcaccgaggtcatggacccg
cacaaggatgtgcttcaagacatgatcccaccccgcaagcacctgcttcgccatcagcct
gtgaatgcccaaattggactcatggagggcaatactttttgtaccacactcaatcctcga
ctcttcaccatagacctgaaaatcatggagcacaaggtgttcttcacggagctgctctcc
ttgtgtgaggcggatgaccaatcgctccagaagctaccctgctacaagtccatcagtaac
ttggttccattgaggaaatccgccttaaaggccctcgcggcttgtcattacattcccgaa
tgtcgcgacaagatcttcaatgtcatctatagcaaagccctgaacagcaccaacaacgat
ctggtcgaagctggttacgagtgcatgaagaagttcatcagtggctttgaggtggacatc
aaactagtgaccgagctcaccaaacccatcatcagtaacctggccgactatcgcaacctg
acgcaaaacatcatcgcccgcttgtgcttcctcgccgagcttttccccaaggtgttcaac
gagaaactctgcgagcaactcttgcaattattgaagaaatggctcgagatctctatcgtg
gcgcacaagcaaatgcaacagggcatctcgaagaccagttggttgccccaattgaaagtg
gccgctgccatcgtgaggctctttcaaaagatcccgccttctcacccgcctcaaaagatc
atcgagatgctctgtaaactgatcttgaccacagagcgaaatctgttgattgaacccgga
agcattttgcgggagcctctcatcggctatctgatcaaatatccgtccgagacggtcgaa
tactttaccaacgatatcacggccaaagacccgcaaaatggccgattcatcgaattcatt
atgaagcaccaagagggcaaggtgttccgcgaggccttgaaactgaaaatcggcaaactc
atcggcatgatcatgggcacgaatcaacttcctactcccattcagcagcagaaccagccc
caaatcacgcccaaagagcgggctgatatccaattggtctgcatacggatggtttgggtc
atggtgaaacatgatagggaatggatcaaggaccaacaatccctcgtggacgccctgaag
cgtgtctggaaccaagatgcctatcacgacaaatacacgaaaggcgacaccgtggactac
tcacaatggaaagggccaaaagtgttggttaagatcatgctcgagtacttcaagctccac
cagaacaccgagatcttgttgctgtttcaactgttgagagccctggtcggacgctacata
gcggatttccaattcctcaaagacttcctcgagaacgaggtctgccaagtgtacagcacc
caatggaaacgcgcggccttcttcgagtttgtccgattgtggaacttggccgagtcgaac
ctctctcaagacttgaaaggcaagatcctccagttcattatcattccgtgtttctcgttg
agtttcgaacagggcgaaggcgactccttgatcggcagcccaccctcccccgatcaggat
aacccggaaaacgtggtctcaaccttcatcaatagtatcatcgacccggaatcgcctttt
ggcacttcggacacagtccggatcctcttgctccaattctcctgccttctggtggaccgg
ggagccgctcacattcacgacgccagcaacaagaagcaaggcaacaagctaagacgactc
atgacttacgcgtggccttgtctcttgagcaagaactgtgtggacccggccacgcgatac
cacggccatctcctgttgtcgcacatcattgccaagttcgccatccacaagcggatcgtg
ctccaggtgttccacagcttgctcaaggctcacgccgtggaggctcgcacggtggtgaga
caggcactcgagatcctcaccccctccatgccaggcagaatggaagatgggaacacaatg
ctcacccattggaccaagaagatcattgttgaagatggacacaccggatcccagttggtc
catattctgcaattggtggtcaagcacttcaaggtgtactacccggtgaggcaccatctc
attcagcacattgtcagctccatccaacggctgggcttcactgccaccgccaccattgag
cagaagaagttggccgtggacttgtgcgaaatcgtcatcaactgggagaagcatcgcgtc
aaagaggagagcgaggccaacgctgacagttccagttcagccagtacgggtagcggcacc
ggcgctagcaacgcgcccaccactaaccccgcgggaggggaggtggttgtgggaggcgtg
aagcgctcagcctccaccgatattggccccgagatgaagcgcaagatgcctggtttggcc
caggtcaaaaccgtgactatgggcgcgacgggggctacggctcatgtgaccacgaccgcc
agcaacagccgtgaagacccgaacaaacctctgaacaaggcccattgcgacgctattgtg
aactatctcctccgattggcgtgccaagtgagcgatgctcaagccggaacgggtggatcg
ccgggtgaaatgctgtctcgacgatgtgtggctttactgaagacggccctcaaagtggag
gtgtggcccaattgcgatctcaaattgggggctttcgagaagatcttggccggaccgcag
ggcgtagactcgaaccaacccaattacgtgaacatttgcacctgtttggacattctcagc
ttcttgctctccatcctccggaaagatcaggtcctcaccgccttcaagccgctccaaaag
gccatctcaacgtgcatgaactgcccgaatgccaaagtgatccgagccgtgcatagcctc
atgtccagactgatgaatctcttccccaccgagcccacctcgtccaacgtggcctccaaa
catgaggaactcgaacagctctacgccatggtgagtcgggtgatttacgagggcctcacc
aactatgagaagaactctcaagctgccacgtccagtctctttgggacgttgatgatgttg
aaagcggcttgcatcaataactcgtgttacattgatcgactgatcaccagcttcatgagg
gtgcttctccgcatgttcaaggagcatctgaacccgcccaacaatgagggcacggctgcg
gccagtgaattgctcatcttgagcttggatttggtcaagaatcgcgtggctgtgatgggg
attgacatgcggaagtcgttcattggtcagatattggtgggactaattgagagatcccca
gacgtgaaggtcatgaaagccatcacgaagatgctcgaggactggatgaagatcaaggac
gtgaagctcatcaatcaaggacccagcttgaaggagaaatccattcttctggtcaagatg
atgcaatacgtggagaagcgatttccggatgacgccgagctgaatgctcaatttttggag
ttggttaattttgtttaccgagaagatgcgttcaagaactccgagctcacttcgaaactc
gaaggtgctttcctcgccggtctccgatgcacccaaccccacatccgggccaagttcttt
gaggtgtttgacaacagcatgaagaagcgcctccatgaacggctcatgtacatcatctgc
tctcagaactgggagtctatgggaccgcactattggatcaagcagtgcatcgagctcctc
ctttccatcgccgtggccggcctcccaatcaataattgcacgcccaccagtcgattgcct
accatgaccacggtgattgccttggctgaacccggcgaccggaacgccttcgacgtgctc
agtagcatcaaggaggagcccacggacgtggaaaccgtcgaggctcacgataaagaggag
gaactcaccaccgaaatggacctggccaaccacgccgactccacgctcaagaaggaaggt
cttactaatcacaccacatcgttgaatcagctcatcagccgacaatacaagttcctcgaa
tccataggcgaggtcaagaccatccacttcctcaatgccacggctcaattggctcacatg
gacaacggactggctgaatacatctggctgaacctgttgccccggatctggaagattctg
gcggatcgtcaacgagagactttggcggctgaggtcgtgactttcatctgctcagggatc
catgtggtccagaaggattgccagcctagtgcaatgaataccttctacgaggctctcacc
ctctgtcagcccaccatcggcatcaaacccgccgtgttgaagtacttgggcaagtcccat
aatctgtggcaccgcgcggctctccagttggaacatttgtccttcgaggccgttccgccc
gccaacgtcatcaagacccggaaggatcccgtggagcaattcgactttgagccggtcatt
agtctgaccccgcaacaagaggccatggatgcgctggccgaaatgtacgcactcttgcga
gaggaggacttgggcgccgggctctggcagaagaaagcacagtaccaagagacgaacatt
gccattgcttacgagcaacagggatacttcgagcaagcccaaggggcgtatgaactagcc
atgaccaagtatcgcaacgaccacaccactcagcccagttccatcaaaatccaacaagag
gtgcgtctttgggaggagcattggatcaggagctcgaaggagctcaaccaatgggagacg
ttgctcgactacggcaacacccagggcgtgagcaacccgttgttggttctggaatccgcc
tggcgcaacaaccccaattggaccctcatgaaagactccctgacccaagtggaaacgggc
tatccaaaagagatgggttggaaagtcaacctctacaaaggctacttagccatctgcaac
accgaggatgctcatctacccatggtggagcgttatgtcgagcaagcatccaccttgtgc
atgaaggaatggcggcgtctcccccacgtggtgtcccacattcatttgccctatctccaa
gccgcccagcaggtcatggagctccaagaagcggcccaaatccaccaaggattgctccat
gctcgacaaaactcgctccacgacatgaaagccattgtgaagacctggcggaatcgcttg
ccagtcatctctgacgacctttcccattggtcggagatcttcacgtggcgccagcaccac
taccagtttatcgccaatcactacaacaatgagcaagtggaccaagcgagcaatcatagc
atgctcggcgttcacgcctccgcccaagccatcattcatttcggaaagattgcccgcaag
cacaacttgacgagcgtgtgtctggaatccttatcccggatctacaccatcccgagtgtg
cccattgtggactgcttccaaaagatccgccaacaggtcaagtgctacgtccaaaccgcc
gtggctttgggcaagaacgagctgcaagagggcctggaggtcatcgagtccaccaatttg
aagtacttcaccaaagagatgaccgccgagttctacgctctcaagggcatgctgctagcc
caaatcgggcgatccgaggatgccaacaaggccttttccgccgctgtgcaaatgcacgac
actctggtcaaggcctgggcgctttggggcgattatctcgagagcatcttcaccaaggaa
atgaccaatggccaacctcgaaccatcaaattcggagtggaggccatcacctgcttcctt
cacgcgtgtcgccatcagaacgagtcaaagtcacgcaagtacctggccaaggtcctgtgg
ctcctcacctacgacgatgagaatctcgaattggcctcagctgtggagaagtacaacatc
ggggtgccgccgattcaatggctaccgtggatcccgcaactcctcacgtgcttggtgcga
agtgaaggcaaactggtcttgaatctcttgagcacagtgggtcggatgtttcctcaagcc
gtttacttccccattcgaacgctctacctgaccttgaagattgagcaaagagagcgggtc
aagaccacgggcgatcaaggtcagagcatcaccgagcgcaggagctcggacagtcccagc
caggcccaagaccaggccggagggcctcaaggaggtcaggaatccggtcccattcgagca
acggcctccatgtggcggtgctcgagaatcatgcatatgcaacgtgatcttcatcccact
gtcctgtcaagtcttgagggtatcgtggatcaaatggtctggttccgggagaactggtac
gaggaagtcctccgtcaattgcgacaagggctggccaagtgctatcttattgcattcgac
aaccgcaccacggtcagcgacgcccacatcacccctcacacgctgaactttgtcaagaaa
ctcgtgtccactttcggcatcggcatcgagaacatttccagttcggtcaattcgtcctat
aactcggccgcctcagaaagtctcgttcgacgagctcaagccagtgcccaagatcccgtg
ttccagaagatgaagtccgagttcacttcgaatttcgatttcacggtccccggtgccatg
aagttgcagaacttgatccagaagctgaagaaatggatcaagatcctggaagcgaaagtg
cgcgtcctgcccaaatcgttcttgatcgaggagcgttgtcgattcttgagcaacttcagt
cggcaaactgcggaagtggaactccccggagagctcctactgcccaaacactcccactat
caggtgtacattcaacgattcatgcccaaagtggagaccgttcagaagcacaactccgca
gcccgacgtctctacattcgtggccacaacggcaagatctacccgtacttggtggtcaat
gactccgggttggccgatgcccgacgagaggagcgggtcttgcaactcctcagaatgatg
aaccatcttttaggcaagcataaggagacatcccgacgattccttaacttcaccgtcccg
cgggtagtggccgtatcgccgcaaatgcgtctcgtcgaggacaatcctcattcggtgtcc
ctgctcgacatctacaaggatcgttgcttcaagcggggcttggagcacgacaatcccatt
gccaagtactacgagcggctggccaccgttcaagccaagggatctcaagccagtcaccaa
gtgctccgtgacattctcagcgaggtccaacgtagcatggtgcccaagagcctcttgaaa
gaatgggctttggtcacattccagtcctccaccgactattggaccttccgtaaggtgttc
acgcttcaactggctctctcggcctttgctgaatatgtcctacatttgtcgcggctcaat
ccggacatgatgtacatccaccaggattctggcctcgtcaacatctcgtatttcaagttc
gacgttgatgatgtgaacggggatctggacagcaatcgtccggtgccattcaggctcacg
cccaacatctacgagttcctcaccgaaatcggagttcggggcccgctcacggcctccatg
atcagtgcggcgcggtgcttcgttcatcccaacttcaagattcaggctatcctgcgggcc
attcttcgcgatgaaatgatcgcgttcaacaagaagacggatgcgggttccaatggcgga
tcagtttcgggtgcggcctcgggtggcacggctgctacgggtcccaacgaggctaataca
gacatgcgggatcgcgagttggtgatcacgatggtgaccaaagctgtgaatgcgatcacg
cagagattgtccagtttgtcggtgtttgatggaaccgattccaaggtagggactttggtg
gccgcggccaattcgcacgataacctgtgccgtatggacccagcatggcatccttggctg
taa
DBGET
integrated database retrieval system
