Tigriopus californicus (tidepool copepod): 131884456
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Entry
131884456 CDS
T09700
Name
(RefSeq) uncharacterized protein LOC131884456
KO
K04885
potassium voltage-gated channel Shab-related subfamily B member 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131884456
Ion channels [BR:
tcf04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
131884456
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
BTB_2
Ion_trans_2
PKD_channel
MBF1
Motif
Other DBs
NCBI-GeneID:
131884456
NCBI-ProteinID:
XP_059088224
LinkDB
All DBs
Position
8:10047368..10088401
Genome browser
AA seq
1246 aa
AA seq
DB search
MSSDPGGGGGGGGGGGGGGSGGGGSGTGGGCAGDDPPPLPTTQPPPTPSLQKTTANNTIN
NTYGLGPGLVPSDISRALEETANVLAAPNSVSSPGRGDLDSPTGLNGPNGASTTSKWDED
TQSENGLPGSTSLPEGRCGGSTVPPDSFMIARAKALNRRVLINVGGTKHEVLWRTLDRLP
HTRLGRLRECNTHEALMELCDDYNLVNNEYFFDRHPRSFSSILNFYRTGKLHLVEEMCVL
AFSDDLDFWGIDELYLEACCQHKYHQRKEHVHEEMRKEAESLKTRDEEDFGDTRCSEYQK
FLWDLLEKPTTSIAARVVAVISISFIIMSTIALTLNTIPAVAAEDQFGNPIDNPKLAMVE
AVCITWFTLEYVIRFAASPDKWQFVKGAMNVIDVLAIMPYFLSLFIMESNQNSQGFEDVR
RIVQVFRIMRILRIFKLARHSTGLQSLGFTLKNSYKELGLLMLFLAMGVLIFSSLCYFAE
KDEEDTAFHSIPETFWWAIITMCTVGYGDISPTTFLGKIVGSMCAVCGVLVIALPIPIIV
NNFAAFYKNEMRREKAVKRKEALERARREGAIVAFHHVNLRDAFAKSMDLVDVIVDAGRN
MSVMGSQLEIDMDPEGDLTVVPRHHGQTGTGCYRLHDHRIGETNHGGQGPTFRALPGGGA
PPRPNPPSSDVPSSTQLQKHSAIGHRGPISGLGHDGPGPPNGGSFQPHILDMPIQGDHPS
QQHSSRTQKVLNELSTPNKKSMQSPRPYDLHSSSVINISTVDGTLAMEMMSYGNKLADQY
SSLDSSDTFLSCNTHPYPSQGSLAGLEELAAKGSMAANGSMPAVNISGFSNNVFNGNSVF
STLFDPRKRSPASPKGNASPANHHRRVRIASRSLSSDNELEAWADCIEEGEKRYQDESEP
KHRRSRLTQGPSPKLRPRFDLESTNQVEFDLTDDERPRHSYMTTRGLAAVYQGLASLSEK
LGRSNKYCASGPMESINLSVVKSVTSPSGQRKKSILKKSDSLGGRGSHGGDPERENLLVS
DPDSLNATPLAPRKYLHHASPKYDSHERIPLPPHASLPNVHSKDQHQCYEGASTGTPPSS
SFTSDELLDERSAPSHIAMKDIQTSTTTLAQSIAASDNTKATNTTKFERGRDPSHCRDIG
ITAKTAVRDDSGIGFESSNLATAPNGPRCTNQTCRINKPSSASSTSTRIVCICGHHMVQT
ISSPPEDESTQRISPNLTHAKAEEGFGLPQATRLLTKHSEVKNSKS
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagatcctggaggaggcggaggaggcggaggaggcggaggaggaggtggaagt
ggaggaggtggaagcggaacaggaggaggatgtgccggcgatgatccaccccctctcccc
acaacacagccaccgccaacaccgtctttacaaaaaacgactgctaataatacaatcaac
aacacatatggcttgggcccaggcctggtccccagtgatatctcccgggccttggaggaa
accgccaatgtcctggccgctcccaattccgtttcaagtccaggacgaggggacttggac
tctcccacgggcctcaatggtcccaatggggcgtccacaacgagcaaatgggacgaggac
actcaaagtgagaatgggttgccgggttccacttcgctccccgagggtcggtgtggtggg
tcaacagttcctccggattcatttatgatagcacgggccaaggccctgaatcgacgtgtg
cttatcaatgtgggagggaccaagcacgaggtgttatggcggacgctagacaggttaccc
catacccgattgggtcgacttcgcgagtgcaacacccacgaagccctcatggaactttgt
gatgactacaatctggttaataatgaatatttctttgaccgccaccctcgctcatttagc
tcaatattaaacttttaccgcacgggcaagctccacttagtggaggaaatgtgtgtgcta
gccttcagtgacgatctagacttttggggcatcgacgaattgtacctggaggcgtgttgt
caacacaagtaccatcaacgcaaagagcatgttcacgaagagatgcgaaaagaagccgag
tcgttgaagaccagggacgaagaagactttggtgacaccagatgctctgaatatcaaaag
tttctctgggatctgcttgaaaagccaaccacctcaatcgccgctagggttgtggcagtg
atatccatttctttcattatcatgtccactattgcactaaccctgaacacaattcctgcc
gttgccgctgaggaccagttcggcaaccccattgacaatcccaaactggccatggtggaa
gcggtgtgcatcacctggttcaccttggagtacgtcattcggtttgccgcctctcctgac
aaatggcagtttgtcaagggtgctatgaatgtgatagatgttctggccatcatgccctac
ttcttgtccttgttcatcatggagtcgaaccagaactcccaagggtttgaagatgtgcgc
agaattgtccaagtttttcgaatcatgaggattcttcggatcttcaaattggccaggcac
tccacgggtctgcagagcttaggttttactttgaaaaacagctacaaagagctgggcctg
ctcatgctcttcctagccatgggggtgctgatcttctcgagtctgtgttactttgccgaa
aaggacgaggaggacacggctttccatagcatccccgagaccttttggtgggccatcatc
accatgtgtaccgtcggatacggggacatctcgcccaccacgttcctcggcaagattgtc
ggctctatgtgtgcagtttgcggcgtattggtcattgcactgcctattcccatcattgtc
aataattttgccgccttttataaaaatgaaatgcgcagagaaaaggctgtgaaacgaaaa
gaggccctcgagagagcccggcgagaaggagccatagtggcctttcaccatgtcaacctg
agggatgccttcgccaaaagtatggatctggtggatgtcattgtggacgcaggtcgtaac
atgtccgtcatgggtagtcagctagagattgacatggatcccgagggcgatctcaccgtg
gttccccgacatcatggtcagactggcacgggctgttatcggctccatgatcaccgtatc
ggtgagaccaaccatggtgggcaggggccaactttccgtgcccttcccggaggcggtgcc
ccaccacgtcccaatcctccctcgtcagatgtcccatccagtactcaactccaaaagcat
tccgcaattgggcaccgaggtcccatttcgggtctgggccatgatggacccgggcctccc
aatggtgggagttttcagcctcatatattggatatgcccattcaaggtgaccacccatct
cagcaacattcgtccaggacccaaaaagtgctcaatgaactttctacacccaacaaaaaa
tctatgcaatcacctcgaccatatgatttgcacagctctagtgtgatcaatatttcgacc
gtggatggaactttggccatggaaatgatgtcctacggaaataaactggccgatcagtat
agcagtttggatagttcggacactttcttgagttgcaatacccatccatatccttcccaa
ggctctttggcaggcttggaagagttagccgcgaaaggctcaatggctgcaaatggttct
atgccggctgttaacattagtggctttagtaacaacgtgttcaatggcaacagcgttttt
tctaccctgtttgatcccagaaaacgctctccagctagtccaaaagggaatgccagtccg
gccaatcaccatcgtcgagtacggattgcttcccgaagtcttagctcagacaacgaactg
gaagcttgggctgattgcattgaagaaggcgaaaaacgttaccaagatgagtctgagccc
aagcatagaaggtctaggctcacacaaggcccctcgccgaaattaagaccgcgttttgat
ttggagagcacaaaccaagtagaatttgatctcactgacgacgagaggccaagacattct
tacatgactacacgtggtctagcggctgtttatcaaggacttgcttcgttaagtgagaaa
ctgggaaggagtaacaaatactgcgcttcgggtccaatggaatcaatcaacttgtcggtg
gtaaaatcagtcacaagtccaagtggtcaacgaaagaaatccattctgaagaaatctgat
agcttgggagggcgtggctctcatggaggggacccagaacgagagaatctcttagtgtct
gatcctgacagcttgaatgccactcctctggcgccgcgaaaatatcttcatcatgcttct
ccaaagtacgattctcatgagaggattcctctaccccctcatgcttctctgccaaacgtc
cattccaaagatcagcatcaatgttatgaaggtgcgtctactggaacgcccccgtcctca
tcgtttacctcagatgaacttttggatgagcgaagtgccccgtcccacattgctatgaag
gatattcagacgtccaccacaacccttgcccaaagcatagcggcgtctgacaacacaaaa
gctactaatactaccaagtttgaaaggggccgagatccgagccattgtcgagatattgga
attactgccaaaactgctgtgcgggatgactctggcataggtttcgagtcaagcaatctt
gccaccgcacccaatggtccccgatgcacaaatcagacttgtcggattaacaagccttca
agtgcgtcatccacgtccactcggattgtctgcatctgtggtcatcacatggtccaaact
atcagctcacctccggaagacgagtccacacaacgcatcagtccaaatttgacccatgca
aaagccgaggaaggttttggtctccctcaagctactagattactgacgaaacactccgaa
gtaaaaaactctaaatcctag
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