KEGG   Tigriopus californicus (tidepool copepod): 131884493
Entry
131884493         CDS       T09700                                 
Name
(RefSeq) lissencephaly-1 homolog isoform X1
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf00565  Ether lipid metabolism
tcf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    131884493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tcf03036]
    131884493
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tcf04147]
    131884493
Chromosome and associated proteins [BR:tcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    131884493
Exosome [BR:tcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   131884493
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_EML Beta-prop_IFT122_1st WDR90_beta-prop_4th ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_SPT8 LisH_PAC1 Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_IFT140_1st LisH Beta-prop_WDR75_2nd Nucleoporin_N Beta-prop_NWD2_C Beta-prop_RIG_1st Beta-prop_WDR11_2nd PROPPIN ARMC9_LisH LisH_2 SutA-RBD LisH_WDR26 KNTC1_N
Other DBs
NCBI-GeneID: 131884493
NCBI-ProteinID: XP_059088279
LinkDB
Position
8:9174389..9177328
AA seq 411 aa
MKMVLSQRQREELNKAIAEYLQSNGYNDALEHFKRESDMPGDIDKKFTGLLEKKWTSVIR
LQKKVNELEAKLTEAEKEFISGAPTREKRSPGEWIPRPPEKYALSGHRAPVTKVLFHPIF
SLVISASEDSTLKVWDFETGDFERTLKGHTDSVQDVAFDAQGKFLVSCSADMSIKVWDFQ
TYDCIKTLQGHDHNVSSVCFVPSGDHIISSSRDKSIKMWEVATGYCVKTYKGHREWVRMV
RVFSDQYIASCSNDQTVRVWALQTKDCKLELREHDHVVECLAWAPESATGAINEAANEDN
KSEGGKFIGPFLASGSRDKTIKIWDITSGSCLFTLVGHDNWVRGLVFHPGGKYLLSASDD
KTMRVWDVAHKRCQKRLDTHTHFCTSLDIHRSGPYVVTGSVDQTVKIWECR
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgaaaatggtcttgtcccagcgacaaagagaggaactgaacaaggccatcgccgagtat
ctccagagcaatggatacaacgatgccttggaacactttaaacgtgagagtgatatgccc
ggtgacattgacaagaagttcaccggattgctcgagaagaaatggacgtcagtcattcgc
ttgcagaaaaaggtgaacgaattagaggccaaattgaccgaggccgagaaggagttcatt
tccggggctcccacacgagaaaagcgctccccgggcgaatggattccgcgcccaccagaa
aaatacgctttgtccggccatcgggcgcccgtcaccaaagtactcttccatcccattttc
agcctcgtgatatccgcctcagaggactccaccctcaaagtttgggactttgagactggc
gacttcgagcgtactctcaaaggtcacacggactccgtgcaagatgtcgcttttgatgcg
cagggcaagtttctcgtctcgtgctcggcggacatgtctatcaaggtatgggattttcaa
acatatgactgcataaagacacttcagggtcacgaccacaatgtgagcagtgtttgtttt
gtgccttccggcgaccacatcatttcatccagtcgcgacaaatctatcaagatgtgggag
gtggccaccggctattgtgtcaagacctataagggtcatcgagaatgggtgcgcatggtt
cgagtcttttcggaccaatacattgcatcgtgctccaacgaccagacagtgcgcgtctgg
gcacttcaaaccaaagattgcaaactggaactaagggagcacgatcatgtggtcgaatgt
ttagcttgggcccctgaatccgccacgggggccatcaatgaagctgccaacgaggacaac
aaatccgaaggaggcaagttcatcggtccattcttggcctcgggctccagggacaagacc
atcaagatctgggacatcacgtccgggtcatgtttgttcacgctcgtgggccacgacaat
tgggtgcgcggattggtgtttcatccggggggtaaatatttgctctcggccagtgatgac
aagaccatgcgagtgtgggatgtggctcataaacgatgtcagaagaggctcgatacgcac
acgcacttctgcacgtccttggatatccatcgctccgggccttatgtggtcacgggaagc
gtagaccaaacggtgaaaatttgggaatgccgctag

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