Tigriopus californicus (tidepool copepod): 131884510
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Entry
131884510 CDS
T09700
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
131884510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131884510
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
131884510
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
131884510
NCBI-ProteinID:
XP_059088304
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All DBs
Position
8:8270538..8275150
Genome browser
AA seq
1057 aa
AA seq
DB search
MKKTAHTRGNTAQASGPPTVPEDRLENNPTSPEADRPVGAASADGPAPELSSIRPQYDLL
CRELNMDTLTAEEAWQSYQQIRQHYTLEGHQLHWLACALYVACHNAPMATVGGSVDDSVE
GNGVSLTRLLRSCKLSLIQFFNKAKKWADMSNLKAQFREKIDSLERNFAVSNVIFKKYQP
IFVELFKDPAKDPQKMVRSRKQKKPPCTPGDVFDFCWGLFVRVKKDFTAISDDLVNSYHL
LLSCVDYVYGNALMAQRHDLLNERFQHPEGSVDEPPCILEQLCRMHDGIISEVKTIREHW
WKPHIKKFFDQKLLKGDPLSLTGILDPLVFDVNAKNVRKDYEAYILSIGEYDERVFLGED
ANEEIGTPSKFSGHNAVDISDVGEKLVARRNLNTQFEGSNLIPTTPLSGKHYLRAKEQLK
VTPVSTATYLVSRLNALIGRREAEPSQRLLSVFQSCEIDPKEAVVKRVQDMGDTFCSQYT
APSDKHPGSHNSFARMRLKMGVILYYKMLESILISEQKKNKPLANLLEHDLFHQALFACC
LEVVIFSYNSQRTFPWILDTLKLEPIHFYKVIEVIIRTEDSLARDVVKHLQRIEEQILES
RAWTRESPLWEAIQKDPLGVPTCEEVSLPGQHVGEPQIEPVPGQSPLSHHKRPFAVKSPL
AGDRFKSPVVSAVARRQLAFGDAPNQIAPTSPVRAGQSLLSPQKQYVQVQGQSGPVTPTG
AIRSIGNGKIMMIIDDEGSAQPLRPKRTGSLALFFRKVYHLAHLRLDLLCHTLQLTDEDI
KRKIWTTFEHTMIKHTLLMKDRHMDQLLMCSLYIVCKVVGQDKNFTDIMKNYRNQPQAAS
HVYRSVLLRTKSDLMAGGNASDESQTDDKEKLPPIKAHPTPTKLAASSSIVDGEERGDLI
KFYNTVFMEKLQEFSRKFRRSRQNEAPPLSPLPKLRAHPQSPCRKVSDNHKVFIRPLKSA
PEDKVRFNPLSPHKPLSYSFSRSPAKDLAKINALMRTEVEKKTTVGKRLLTDSSSTGSAM
ILIKEGEPPMKMQILGGSGAVNAKLGLILNDRSSDAS
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacggctcacacccgtggtaacacggctcaggccagcggtcctcccacggtc
cccgaggaccgcttggagaacaacccaaccagccccgaggctgaccgaccggtgggagcg
gcctcagccgatggtccagcaccggaattgtcttcgatccgcccgcagtatgatttgctg
tgtcgggaactgaacatggacacgctgacggcggaagaggcgtggcaatcctaccagcag
attcgtcagcactacacgctcgagggtcatcaattgcattggttggcctgcgcgctttac
gtggcgtgccataacgcccccatggccacagtgggcggctcggtggatgattcggtcgaa
ggcaatggcgtgtccttaacgcgattattgcgctcgtgcaagcttagtctcattcagttt
ttcaacaaagccaaaaaatgggccgacatgtccaacttgaaggctcaattccgcgagaag
atagactcgctcgagcgcaactttgccgtatccaacgtcattttcaaaaagtatcagccc
atctttgtcgagctctttaaagatccggccaaggatccacaaaagatggtgcgctctcgc
aagcaaaagaaacctccttgcactccgggcgatgtgttcgacttttgttggggtctattt
gttcgggtgaaaaaggacttcaccgccatttccgacgatctggtcaactcgtaccatttg
ctcttgtcttgtgtggactacgtgtacgggaacgccctcatggctcaacggcacgatctg
cttaacgagcgattccagcaccctgagggctccgtggatgaaccgccctgcatcctggaa
cagttgtgccgcatgcatgatggcattatctccgaggtcaaaaccatccgtgagcattgg
tggaagcctcatataaaaaagttcttcgatcaaaagttgttaaaaggtgatccgctaagc
ttgacgggcatcctggatccgttggttttcgacgtgaacgccaagaacgtccgcaaagat
tacgaggcctacattctaagtatcggagaatatgacgagcgcgttttcttgggcgaggat
gccaacgaagagattggtaccccttccaagttctcgggccacaatgcagttgacatcagc
gacgttggtgaaaaactcgttgctcgacggaatttaaacacgcaatttgaaggctccaac
ttaatccctaccaccccgttgagtggaaagcactatttaagggccaaagagcagctcaag
gtcacccccgtgtccacggccacttacttggtgtcacggttaaatgccctcatcggtcgg
cgtgaagccgaaccaagtcagagactcttgagtgtgtttcaatcctgcgagatcgaccca
aaagaggcggtggtgaagcgggttcaagacatgggcgacactttttgttctcagtacaca
gctcccagcgacaaacaccctggctcgcataattcgttcgcgcgcatgcgtctcaaaatg
ggtgtcattctgtactacaagatgctggaatccatcctgatctctgagcaaaaaaagaac
aaacctctggccaacctcttagagcacgacttgtttcatcaagccttgttcgcctgttgc
ctggaggtcgtgattttctcctacaattctcagaggaccttcccttggatcctggatacc
cttaagctcgagcccattcacttctacaaggtgattgaggttattattcgtaccgaggac
tccttggcaagagacgtggtcaaacatcttcagagaattgaggagcagatcctggaatcc
cgcgcttggactcgcgagagtcctctctgggaagcaattcaaaaagacccgctgggcgtg
cccacttgtgaagaagtctccctacccggtcagcatgtgggtgaacctcagatcgagccg
gttccgggtcaatccccactctcccatcacaaaaggccgtttgccgtcaaatcgcctctt
gcgggagatcgattcaaatctccagtggtatctgccgtcgccagaagacaactagcattt
ggagatgcacccaatcagattgcacccacttctcccgttcgagccggacagtctttgctc
agccctcaaaagcaatacgttcaggttcaaggccaaagcggtcctgttaccccgaccgga
gctatcagatcaataggcaatggaaagatcatgatgatcatcgacgatgaaggctccgcc
caacccctgcgtccgaaacgcactggatcgttggccttattcttccgcaaagtgtaccac
ttggcacatcttcgccttgatctcttgtgtcacaccctccagctgacggacgaggatatc
aagaggaagatctggaccacgtttgaacacaccatgatcaaacatactcttctcatgaaa
gaccgccatatggatcagctcctgatgtgctcgctgtatatcgtttgtaaagtggtcggc
caagataagaacttcacagacatcatgaagaactaccggaaccagccccaagccgccagt
cacgtgtatcgaagtgtgctcttgagaaccaaatcggatttgatggctgggggcaacgcc
tccgacgaaagtcaaaccgatgacaaagagaaattgcctccaattaaggcccaccctact
cccaccaaattggccgcctcatccagtatcgtggacggtgaagagcgtggggatttgatc
aagttttataacaccgttttcatggagaagctccaagaattcagtcggaagttccgccgc
agtcgtcaaaatgaagcccctcccctttcaccgctacccaaactacgagctcaccctcaa
tcgccttgtcgcaaggtatccgacaatcacaaggttttcattcgcccgctcaaatctgca
cctgaagataaggttcgattcaaccccctttcacctcacaaaccgttatcgtacagcttc
agtaggagtccggccaaggatttggccaaaatcaatgcgctcatgcggaccgaagttgaa
aagaagacaacggtaggaaaacgactcctcactgattcgtcttccacaggctcagccatg
attctcatcaaggagggagaacccccgatgaaaatgcaaattttgggaggatcaggcgcc
gtcaatgccaagttgggtctgatcctcaatgacaggagttcggacgcgtcttaa
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integrated database retrieval system
