Tigriopus californicus (tidepool copepod): 131884673
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Entry
131884673 CDS
T09700
Name
(RefSeq) homeobox protein araucan-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131884673
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
131884673
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
131884673
NCBI-ProteinID:
XP_059088497
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Position
8:5612134..5654698
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AA seq
596 aa
AA seq
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MSFPSFAYSSANISSYHNHSAQILNQFAHNASISPSDRSRSPIRGLNPNESMQLQTHSGL
TSPNGAPSTAGGNVTPAGVCLSSGSTGGASTPGAIERINGGTPTHGMAGSGTGSNSAAVS
PILSGPGSHSPAIGGITPTSSGLSFSASSLMGSSVTPCSTSGPMGGSMAGMTDPVTGQLL
ADCDPARLAALSYPRLGAGGLAPMYSAASYPSTDQNPYPSIAMENTFYGTLGNPGASGTA
ADMAAWSASALPPTAGYYSYDHPTLAAYGYGGGYDLAARRKNATRESTATLKAWLNEHKK
NPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPKNKLDDEDVDVSDDDD
KNDDDKHDDDPMQRHLHRDISGLHGMTRSDDHIKDDESKSGIPIPPSKPKIWSLADTAVC
KTPPPSQLQQQQQQQQQLQPSHHQQLGHWGHASSFDMSRSSAAAMSALRSSNMFGMSRPD
FSGMMSSAASQNAHSGGSSDLQADTPPHTPPNNNNKSSQQGQMSGLAGLMGGAMSGMFNG
AGAGGYNGLHNGYGMAAVSAASAAAVSAAQSHDASKLLPFQGLNSHAMNSSSFKMM
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttccttcattcgcctactcaagtgcaaatatttcctcatatcataaccactct
gctcagatcttgaatcaatttgctcacaacgcatcgatatccccgtctgatcggagccgg
agcccgatccgaggcctcaatccgaacgaaagcatgcaattacagacccatagtggcctc
accagtccaaacggagcaccttcgacagcgggcggaaacgtcactccagcaggagtttgt
ctttcatcgggcagtaccggaggggctagcacaccgggagcgatcgaacgaatcaacgga
ggcacgcccacccacggcatggccggcagtggcacgggttccaattcagcggcggttagc
ccaatcttatcaggtccgggatcgcattctcccgccattggcggcatcacaccgacttct
tcgggccttagctttagcgccagcagcctgatgggctcctcagtgactccgtgcagtaca
agcggccccatgggtggtagcatggctgggatgactgacccagtgacgggtcagctccta
gctgattgcgaccccgctcgcctggcggccctctcgtaccctcgtttgggcgctggcgga
ttggctcccatgtactctgccgcatcatatcccagcacagaccaaaatccctatcccagt
attgctatggaaaacacattttatggaactctgggtaatcctggagcgtctggaacggcg
gcggacatggctgcttggtcggcctcggcactaccccccaccgccggttattattcgtat
gatcaccccaccctggctgcatatggatatgggggaggctacgatttggcagctcgacgg
aaaaacgccacccgcgaatccaccgccacactcaaggcctggctcaatgagcataaaaag
aatccttatccgaccaaaggcgaaaaaatcatgttagccatcataaccaagatgactctg
acgcaggtgagcacctggtttgccaatgcccgccgtcgtctcaagaaggagaacaaaatg
acctgggaacccaagaacaaactcgatgacgaagatgtggatgtgtctgatgacgacgac
aagaacgacgatgataagcatgatgacgatcccatgcaacgccacctccaccgtgacata
tctggccttcacgggatgactcgatccgatgatcacataaaggacgacgagagcaaatcc
gggatccccattccaccctcgaaacctaagatttggtccctggccgacacggccgtttgc
aaaacacctccaccctctcaactgcaacagcagcaacagcaacagcagcaactccaacca
tcccaccaccaacagcttggccattggggtcacgcctcctctttcgacatgagccgctcc
tcagccgccgccatgtcggccctccgaagctcgaacatgttcggcatgtctcggcccgat
ttcagtggaatgatgtcctctgctgccagtcaaaacgcccattccggaggctccagtgat
ctgcaggctgacacgccccctcatacacctcccaacaacaataacaaatcaagtcaacaa
ggtcagatgagtggactagccggtctgatgggaggcgccatgagcggaatgttcaacggt
gccggagccgggggctacaatggacttcacaacgggtacggcatggcggcagtgtcggcc
gcttcggcagcagctgtgtcagctgctcaatctcacgatgctagcaagttgctgcctttc
cagggcctgaacagccatgccatgaacagcagttccttcaagatgatgtag
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