Tigriopus californicus (tidepool copepod): 131884709
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Entry
131884709 CDS
T09700
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131884709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131884709
03036 Chromosome and associated proteins [BR:
tcf03036
]
131884709
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
131884709
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
131884709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
Motif
Other DBs
NCBI-GeneID:
131884709
NCBI-ProteinID:
XP_059088546
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All DBs
Position
8:14359455..14369190
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AA seq
1158 aa
AA seq
DB search
MERMEPPSESIPAPHGDKAVLEPTLSTVTMPVTEPVVARPTLVLDGSGGTAKTAAILGGA
KVVPVQIQVVPQGQIPISLVGGNLIRQKFLTATASTATTTNNGSPTGTKSIILTKVQTLN
PGQIRPGILQPKTAKILAISAGQFANATSPSASVNTKETTGGGPPVTPTTTTTTTTTIIT
TTNKIPPTNLVASSPVSGRPNIIRSPAVVNRSGTDPTMGVSSLSLPSSSRRKTAHLLKED
PSVSEKKASPMVVSQSSVKDEITSDENETPPVGLKQAEVSDQLEMNEQQPPKPEVELGKE
AQVVAAGLQDTVTIKVEVVSDIKTKELASFDPFESIDETGKNTKSEEKEIDFKSNEFGAL
EIKDASKSNSETNSDGPEDQTDEDIDLTCKEETPESPVDEGVQGKGGTAKAAAGVKATKL
VDDSPSTNTKKPPQVRPDEIVSCQGCGCYAMAGEFEFLPDSACSRDCLGKIRQKRREKAR
RERELVCQRQRREAKRKEKEKERLESQRKEKEESETKVENEKRLEQEEQDVQDEMEEDGL
REFEEKNSGKGSKGRNVHGHFNQIYPWYDIHRGFSWYRYLEYTNAKAAPARLFVHDRVKK
MVPQFELGMKLEAIDPEHPALICVVTIADIQGSRFRLHFDGHSYSYDFWENMDSPNVLPA
GFCSSHGQRLEPPKGFKGRSFDWNTYLEETRSQAAPAEIFPNQSSKLSDVSSTWRIGMKM
EAVDKHNASLVCVATVTNVLNGRILIHFDGWEMAYDYWIVPSKCPFIHPVGWCEKNGIEL
TPPKGYSNESFSWDRYLEVTGSMAVPPYAFTPVPTESQFRVGMKLEAVDKRNPMMIRVAS
VASVEGHHLQIQYDGWPEEYNLWFEDFSPSLYPVSWCARNDHPLMPPLTPEEIKFYQNRV
ASCPVAGCRGVGHVKGARFNTHMAENACPYATQNRHVEPPLPDRIQGLTLERSRQVLEAR
SKGTTVHQQQQQYQIQQQQQQQQQQQPQGGGRRKRKNRRFFDEDTHISDHSSTGSSHEPP
LKKLLQRSGPVGSSSRFDPQAEEIRSEVFQPRFCHTLHSERLNWKANSEFLREKLAKFEN
HPKKFALLGPKDLANMLRSLFPDLNSEFVSKIQEEEIDGEAFLLLNQSDFVQSMGFKLGP
AVKLFNVVLFIKNQLKAV
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggaacgaatggagcctccgagtgagtcgatcccggcgcctcatggagacaaagcggtg
ttagagcccaccctttctaccgttaccatgcccgttaccgagcccgtggtggctcggccc
actttggtattggatggatcaggtggaacagccaagactgcggccattctcggtggcgcc
aaagtggtcccggttcagatccaggtggtgccccaaggacagatcccaatttccttggtg
ggtgggaacttgatcagacagaagtttctcaccgccaccgcctccactgcgaccaccacc
aacaatggctcacccactgggaccaagagcattattctaaccaaagtccagaccctgaat
ccgggacaaatcagaccagggatacttcagcccaagacagccaagatattggccatcagt
gcgggccaattcgctaatgccacatccccctctgcttctgtcaacaccaaagaaacgact
ggaggaggaccgccagtcactcctaccactaccacaacaaccaccaccaccatcatcacc
accaccaacaagatcccacccacgaatctagtagcatcgagtcccgttagtgggcgaccg
aatatcattcgctcacccgcggtagtcaatcgaagtgggactgatccaaccatgggtgtg
agctccttgtctctaccgtcgagtagtcgccgaaagacggcacatctgctcaaagaagat
ccaagtgtgtcggagaagaaagcctctccaatggtggtatcccaatccagtgtcaaggac
gaaatcacgtccgacgagaatgaaacgcctccggttggactaaaacaggccgaggtctcg
gatcaacttgagatgaacgaacagcaacccccgaaaccggaagtcgaattaggcaaagaa
gctcaagtagtggctgctggccttcaggacacggtgacaataaaagtcgaagtcgtctcg
gacatcaaaacgaaggagctcgcttcgttcgatcctttcgagagtattgatgagacgggg
aagaatacaaagagcgaagaaaaagaaattgacttcaaatccaacgagtttggtgccttg
gagatcaaggatgcatcgaaaagcaactcggaaacaaactcggacggccccgaagatcaa
accgatgaagacattgacctgacttgcaaggaagaaactcctgaaagtcccgttgatgaa
ggagttcagggaaaaggcgggaccgcgaaagcggcggctggagtcaaagccacgaaattg
gtcgatgattcaccatcaaccaacactaagaaacctccccaagtccgcccggatgagatt
gtcagttgccaaggttgtggatgctatgccatggcgggggaattcgagttcctcccggat
tcggcttgctctcgggattgtttgggaaaaatccgtcagaaacgccgggaaaaggctcgc
agagagcgtgaactggtctgtcagagacaaaggagagaggccaaaaggaaggagaaagaa
aaggaacgattggagtcacaacgcaaggagaaagaggaatcggaaaccaaagtggaaaac
gagaagagactcgaacaggaggagcaagatgtccaagacgaaatggaggaagacggtctc
cgcgaatttgaagaaaagaattcgggcaaaggctccaagggaagaaatgtccatgggcat
ttcaatcagatctatccgtggtacgatattcatcggggtttttcgtggtatcgttacctg
gagtacaccaatgccaaagcagcacctgcgcgtctttttgttcatgatcgagtcaagaaa
atggtgcctcaatttgagttgggcatgaaactagaagccatcgaccccgagcatccagcc
ttgatctgcgtcgtgacaatcgctgatattcaaggctcgcgcttccggttgcatttcgac
ggacactcttactcctacgatttttgggagaatatggattctcccaatgtgctacccgcc
ggattctgctcttctcatggccagcggcttgagccgccaaagggcttcaaaggtcgaagc
tttgattggaatacttatctcgaagagaccaggagtcaagcggctccagcggaaatattt
cccaaccaatcatcaaagctctcggatgtgtcgtcgacgtggcgaattggaatgaaaatg
gaagccgtggacaagcacaatgccagcctcgtgtgcgttgccacggtcaccaatgtcctc
aatgggcggattctcattcatttcgatggttgggaaatggcatacgactactggattgtg
cccagcaaatgcccatttatccatcctgtcgggtggtgcgagaaaaacgggattgagttg
acacccccaaagggctactcaaacgagtctttctcgtgggaccggtacctcgaagtgacg
ggatcgatggccgttccaccgtatgcattcactcccgtgcccacagagtcgcaatttcga
gtgggaatgaaactcgaggctgtggacaaacggaatccaatgatgatccgcgtggcctcc
gtggcctcggtggaaggacatcatctacagatccagtatgatggatggccggaggagtac
aatctgtggtttgaggatttttcacccagtttgtatcccgtatcttggtgtgctcggaat
gaccacccgctaatgccaccgctaacccccgaagagatcaaattctatcagaatcgtgtg
gcctcatgccctgtggcgggttgccgtggtgtgggtcacgtcaaaggtgctcgattcaat
acccatatggccgagaatgcatgtccatatgccacgcagaataggcatgtcgagcctccg
ctacccgatagaatccaaggactcactttggaaaggtccaggcaagttttagaggccaga
agcaaaggtacaaccgtgcatcagcaacagcagcaatatcagatacaacaacaacaacaa
caacagcaacaacaacagccacaagggggtggtcggcggaaacggaagaaccggcgattc
tttgacgaagacactcacataagtgaccattcgtcgactggaagtagtcatgaacctccc
ttgaagaagctgcttcaacgctctggacccgttggatccagttctcgctttgatcctcaa
gccgaggagatccgctcggaagtttttcagccccgattttgccacactctccattcggaa
cggctcaactggaaagcgaactcggaattcctccgagagaagttggccaagttcgagaac
catccgaagaaattcgccctcttggggcccaaggacttggccaatatgttgcgttcccta
ttcccagatctgaattcagagtttgtcagcaaaattcaggaggaagaaattgatggggag
gcttttctgctcctcaaccagagcgactttgtccaatccatgggcttcaaactgggccca
gctgtgaaacttttcaacgttgttctcttcatcaaaaatcaactgaaggctgtatga
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