Tigriopus californicus (tidepool copepod): 131884989
Help
Entry
131884989 CDS
T09700
Name
(RefSeq) ionotropic receptor 25a-like
KO
K05313
glutamate receptor, ionotropic, invertebrate
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tcf04040
]
131884989
Ion channels [BR:
tcf04040
]
Ligand-gated channels
Glutamate (ionotropic)
131884989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
SlpA_D2
Motif
Other DBs
NCBI-GeneID:
131884989
NCBI-ProteinID:
XP_059088886
LinkDB
All DBs
Position
8:complement(1186774..1189546)
Genome browser
AA seq
851 aa
AA seq
DB search
MWLSLIWVCLVLVLVQGNNILLIYEKDDLDMFNLFKSNVDTALVTISELAMNHDDDLDEG
PFCDALGSDQFALVVDLSWSGWKVAKTKSDDQGIPYVHVEASNQAFVQGVDEFLFEREAI
DAALLFESESELDQSLYHIIGNYHLRVLVLSMTESKPFERMADLRPIPSAFVTFGTTQEQ
TKMIDKAIKNRLVRRDSRWNFVVEDFDAPNFAVQGVEVDIIIASIAQENCCQLAEKPGSG
SACQSDCTAGKKPKHFIVKKAAQTISKVVPSLAPKQYQCSTPDTPKNESQTTFTTAMTSA
LEGSNYVLNSKGTFNFPLKMEFQLVHSANNTKELAATWSHTTGVEFVPKFVNRTIPRFFR
VGMSVAVPWLYEKMGRDGSPMKDTNGNIIYEGYCMDLLKKISEKLSFEYEVVISKDQSPG
IAYGKKDDNGDWSGMIGDLARGDTDLIVADLTMTSEREEVIDFVSPYFDQAGISIVIRKR
VQDQSLFKFLSVLKTEVWLGIIAAVISTAILIWLLDRYSPYSARNNKAAYPYPCRDFTLK
ESFWFALTSLTPQGGGEAPKALSGRVLVAAYWLFVVLMLATFTANLAAFLTVERMQSTVQ
NLEELARQSRINYTVVENTTYMEYFVNMAGAEEELYHKWKELTLNNSGNPAKYRVWDYPI
REQYTHILKVVKDTGMVASTQEGFDKVLAQFEGEYAFIHDAARIKYEVLNNCNLTQVGEP
FAEQPYALAVQQGSHLQEELSRVILELQKDRYFESLQSRYWNNSMQNNCPVLDDSEGITL
QSLGGVFIATLIGLGLALVTLSVEVFIQKRKDKSKVHGFGSKRSSGSRTMDPMGELGPPS
KMKGMPSIIGN
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgtggctttctttgatctgggtctgtcttgtcttggtattggtacaagggaacaatatt
ctactgatctatgaaaaggacgaccttgatatgttcaacttgttcaagagcaatgtcgac
acagccttagtcactatctccgagttggccatgaaccacgacgacgatttagacgagggg
cctttttgcgatgccttgggtagtgatcaattcgccctggtcgtggatttaagttggagt
ggttggaaggtggccaagaccaagtcagacgaccaaggaataccctacgtccatgttgag
gcttcgaaccaagcctttgttcagggcgttgatgagtttctctttgagcgtgaggccatt
gatgcggcccttcttttcgagtctgaatcggaattggatcagagcctttaccatattatt
ggcaactaccatctgagggtgctggtcctcagtatgactgagagtaaacccttcgagcgg
atggctgacctgagaccgattccatcggcctttgtgacctttggcaccacccaggaacaa
accaaaatgatcgataaagccatcaagaaccgtttggtgcggcgggattcacgctggaat
tttgtggtggaggactttgatgccccgaatttcgccgttcaaggcgttgaagtcgatatc
atcattgcgtccattgctcaagaaaattgctgtcaactggctgagaaacctggaagtggt
tcggcgtgccaatctgattgcaccgctgggaagaaaccgaagcattttattgtcaagaag
gctgctcagaccatctcaaaagtggtgccatccttggccccaaaacaatatcagtgctct
actccagacacacccaaaaacgaatcccaaaccaccttcaccaccgccatgacgtcagca
ttagagggtagcaattacgttctgaactccaaaggcacgttcaacttcccactgaagatg
gaattccaattggttcacagtgccaacaacaccaaggaactcgctgccacttggtcccac
acaaccggggtggaatttgtgcccaaatttgtcaacagaaccattccccgtttcttcaga
gtgggcatgtccgtagcggtgccatggctctatgagaaaatgggacgcgatggaagcccc
atgaaggacaccaacggaaacatcatttacgaaggatactgcatggacctactgaagaag
atctcagaaaagttgtcctttgagtatgaagtggtcatttccaaggatcaaagccccggc
attgcgtatgggaaaaaggacgacaatggggactggagtgggatgattggcgatttggct
cggggagacacggacctcattgtggccgatctgactatgacctctgagcgtgaagaagtc
attgactttgtctcaccctacttcgatcaagcagggatttcgattgtcattcgcaagagg
gtccaagatcaatctctgtttaaatttctctccgttctgaagactgaggtctggttggga
atcatcgcagcagttattagtactgccattttgatctggttactagaccgatactctccg
tattctgctcggaacaacaaggccgcttatccttatccctgccgagatttcacgctcaag
gagagtttctggtttgctctaacatctttgacccctcaaggaggtggagaggctcccaag
gctctttcagggcgggttttggtggcagcttattggttgttcgtggtactcatgttagcc
acattcaccgccaatttggcagccttcttgacagttgaaaggatgcagtccaccgttcaa
aatctggaggagctggctcgccaatctcgaatcaactacaccgtggtggaaaataccact
tacatggaatacttcgtaaacatggccggagccgaggaagagctctatcacaagtggaaa
gagctcacgctgaacaattcaggtaacccggccaaataccgagtttgggattaccccatc
cgagagcaatacacccacattctcaaggtggtcaaggacactggaatggtggctagcact
caagaaggctttgacaaagttctggctcaattcgagggagaatatgccttcatacatgac
gccgctcgaatcaagtatgaggtgttaaataattgcaacttgacccaagttggagagcct
tttgctgagcaaccctatgctctggccgtccaacaaggcagtcacttgcaagaggagttg
tctcgagtcattttggaacttcaaaaagatcgatacttcgagtcactccaaagtcgatac
tggaacaattccatgcagaacaattgcccagtactggatgattcggaaggtatcaccctt
caatctttgggaggcgtgttcattgccactttaattggccttggtctggcattggtgact
ttgtcggtggaggttttcatacaaaagaggaaggacaagtcaaaggttcacggttttggc
tcaaagagaagctctggatcgcgaactatggatcccatgggagagctgggaccacccagt
aaaatgaaaggcatgccgtcgatcattgggaactag
DBGET
integrated database retrieval system
