KEGG   Tigriopus californicus (tidepool copepod): 131884996
Entry
131884996         CDS       T09700                                 
Name
(RefSeq) transportin-3-like isoform X1
  KO
K15436  transportin-3
Organism
tcf  Tigriopus californicus (tidepool copepod)
Pathway
tcf03013  Nucleocytoplasmic transport
tcf03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tcf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    131884996
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    131884996
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tcf03016]
    131884996
Transfer RNA biogenesis [BR:tcf03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    131884996
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N SIP1 AAA_lid_5
Other DBs
NCBI-GeneID: 131884996
NCBI-ProteinID: XP_059088895
LinkDB
Position
8:complement(2550473..2554846)
AA seq 939 aa
MMEITLDSCPSSDFVVEAIRTLYHHADPKEKEKASLWLHAWQKSVFAWKISDEILHRKID
VESCYMAAQTLRTKIQTSFHELPPEARTSLRDSILEHFNGVDERTNHIISTQICLALADL
LLQMPEWQGAMGELVQRYAQAREFALLELLIFVPEEVNSRQLRLGANRRSEIMEDLRSSA
GFVTEFLHACLAKQQAQTHGEHTTFRISLLKCLSSWVELGIIPILGLENNPLVMHAVLSL
EKVDEHSMVHEAASDLICGIVERMEDLNLTNESCQFELTFFTLIRRLEPAYLLSVAHEDM
SKSTNFCRIFTEFAESSLHRIMSSAPQQPHFSMAILDSVLVCCGHPDYEMPDITFNLWHR
LSEELYQRDDEQTTQIFRPYINRLILALCKHCQMEPDMDQVLEEGEDFTMFRFRVRELIR
DVVFIVGSSNVFKNLFDYVKGASAWEIMEAALFIMSAVAKSVHPTRDENPAQVVESILAI
PPSTHIAVRHTSLKLIGELAEWIDAHPQFLEQILNWLLAGLQDPKLSSEAATALQNMCSQ
CRGKMIPHFEGLLQILKAVDSFNLKPEAANGLIKGVAIILSDFPNEQVAQAMSTMCQMQI
VPLSAIANGALPPGKIAKNSKNDPVLYLDRLSSVFRHVTPNVSENQSHPCVSVVQEAWVV
ISKTCETFQSDVRIMESLCRTMRFILRCVGAQAMPILEPWAKQMVHVYLSHPHSCFLYLG
SILVYVFSSNPSLIPGLLGMMEAFLPPTFQILQAENGLRNHPDTVDDFFRLNARFLQRCP
IPFLQTTFMPSIVECGLLAVYLDHKEANASVMKFFFDLFHAGRSKEEKEDFETRRLLVDQ
IRHNFGAKLVEALLRAAIFNLPSYTFHDIGDVIFELMLLERTCVCHWLGAALKGLPLKDA
NGIEKVTQKQLVKVHKEVTSAEEPKDVSDALRDFNRLWR
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgatggagatcacgttagattcgtgtcccagttcggactttgtggtggaggccatccgg
acgttgtaccatcacgcggatcccaaagagaaggagaaagcctcgttgtggcttcacgcc
tggcaaaagtccgtctttgcttggaaaatatcggatgagattttacatcgcaaaatcgat
gtggagagctgttacatggcggctcagacgctgcgcaccaaaatccagacctctttccat
gaattgcccccggaagctcgcacctccttgcgcgattccatcctggagcacttcaatggc
gtcgacgagcgcaccaatcacatcatttccacgcagatttgtctggctctggccgatcta
ttactacaaatgcccgagtggcaaggagccatgggcgagctggtccaacggtacgcccaa
gcccgggaattcgccttactcgagttgctcatcttcgtcccggaagaagtcaattctcga
caattgcgattgggcgccaatcggcgaagtgagatcatggaggatttgcgcagctcggcc
ggttttgtcaccgagttcttgcacgcttgtttagccaagcaacaagcccaaacccatggg
gagcataccaccttccgcatcagtttgctcaaatgtctctcctcgtgggttgagttgggc
atcatccccattttgggcttggagaacaacccgttggtcatgcacgctgttctgagcttg
gaaaaagtggacgagcactcgatggtacacgaagcggcttcagatctgatctgtgggatt
gtggaacgcatggaggacctgaatctgaccaacgagagctgtcagttcgagttgaccttt
ttcactttgatccgtcgattggagccggcctatcttctctcggtggctcacgaggacatg
tccaagtccacgaacttttgtcggatattcaccgagtttgccgagagctccttgcatcgc
atcatgtcttcagccccacagcagccacatttcagcatggccatcctggattctgtcctg
gtatgttgtggccatccggactacgagatgccggacatcaccttcaacttgtggcatcgc
ctctcagaagagctctaccaacgagacgatgagcaaactacgcaaatcttccgtccttac
atcaaccgattgatcctggccttgtgcaagcattgtcagatggagcctgacatggatcaa
gtcctcgaagagggcgaagactttaccatgttccgatttcgagtgcgagagctcatccgg
gatgtggtgttcatcgtgggatcctccaacgtattcaagaacctctttgactatgtgaaa
ggtgcgagtgcttgggaaatcatggaggcagctttattcatcatgtcagccgtggccaag
agcgtccatcccacgagggacgagaatccggcacaagtggtcgaaagtattctggccatt
cctcccagcactcacatagccgtcagacacacctccctcaagctcattggcgaactagct
gagtggatcgatgcccacccgcagttcttggagcaaattctcaactggctcttggccggc
ttgcaagatccgaagctgtcctcggaagccgcgacagcccttcaaaacatgtgttctcag
tgtcgtgggaaaatgatcccgcatttcgaagggcttttgcagatcctcaaggctgtggac
tcgttcaacctgaaacccgaggcggccaacggtctcatcaaaggcgtggccatcattctg
tccgattttcccaacgagcaagtcgctcaagccatgagcaccatgtgtcaaatgcagatc
gtccccttgagtgccattgccaacggcgctcttccacccggaaagatcgccaagaactcc
aagaacgacccggttctctatcttgaccgcttgtccagtgtgttccgtcatgtgacaccc
aatgtgtcggaaaaccagagtcacccgtgtgtgagtgtcgtccaagaggcttgggtggtc
atatccaagacgtgcgagacgtttcagagcgacgtcaggatcatggagagcctctgtcgg
accatgcggttcatcctgcggtgtgtgggcgctcaagccatgcccattttggagccctgg
gctaaacagatggtgcacgtgtatctgagccatccacacagttgctttctgtacctgggc
tcgattcttgtgtatgtattctcatccaatccctcgctaatccccggcctgctgggcatg
atggaggcctttctcccacccacgttccagatcctgcaggcagaaaatggactccgtaat
caccccgacacggtggatgactttttccgcttgaacgcccgattccttcagcgttgtccg
atcccattccttcagaccactttcatgccctcgatagtggagtgtggccttttggccgtg
tacctggaccacaaagaggctaacgcttcggttatgaagttcttctttgatctcttccat
gctggtcgctccaaggaagagaaagaggactttgaaacgcgtagactcctcgtcgaccaa
atcagacacaacttcggggccaagctcgtcgaggccctcctccgggcggccatcttcaat
ttgcccagttacaccttccacgatattggggatgtgatcttcgagctcatgttactggaa
cgaacgtgtgtttgccattggctgggagccgctctcaagggtctgcctttgaaagatgcc
aatgggatcgagaaggtcacccagaagcagctggtcaaggtacacaaggaagttacctcg
gccgaagaacccaaggatgtgtcggatgccctccgagatttcaatcgactgtggcggtag

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