Tigriopus californicus (tidepool copepod): 131885001
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Entry
131885001 CDS
T09700
Name
(RefSeq) fidgetin-like protein 1
KO
K22766
fidgetin-like protein 1 [EC:5.6.2.-]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcf03036
]
131885001
03400 DNA repair and recombination proteins [BR:
tcf03400
]
131885001
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
131885001
DNA repair and recombination proteins [BR:
tcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
131885001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
AAA_5
RuvB_N
AAA_22
TIP49
AAA_16
Mg_chelatase
AAA_14
AAA_19
Motif
Other DBs
NCBI-GeneID:
131885001
NCBI-ProteinID:
XP_059088902
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All DBs
Position
8:9595196..9597906
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AA seq
639 aa
AA seq
DB search
MDRPAPPDPMESVVQSLIAETNWQLSAQAMDDLGGLNNLANLTLDLTQRTHPHFKVCKWK
WKSALKRDQFETACSATPQTELSVRDAQVWRAWLQKAQREWYQPQKDAPNTIEAPRSDRP
VPPPIVHAPPTAGPPGVRKKATLDQWLTPAGPSGAGATFGLKRGLNPVEDQNRGSSEPKK
RNFGLGAFGFDPPANAPPTPFASYDASGAMGRKPKFGLCPAMEADASRASSLHRTATPRL
PERVENADTPRPNPFRTASEQLVVNYQRQGRLPQSSTQTGPSSATLMKKSLGVAKPSGYG
SFRSPVVSGHETNPTSTPLVSTSNVEKPSSSTEIEVTDERYKNVDPKMVELIENEIMDTG
SAIVWEDIAGLDFVKTTVKEIVVFPMLRPDIFKGLRAPPKGLLLFGPPGTGKTLIGKCIA
SQSNSTFFSISASSLTSKWVGEGEKMVRALFAVASVRQPSVVFIDEIDSLLTQRSDTEHE
SSRRIKTEFLVQLDGATTQGDERILVVGATNRPQELDEAARRRLVKRLYVPLPEAEARFQ
IIQRLMVKERHELSREDMMEIVQETDGYSGADMTNLCKDAAMGPIRSLDYSKIESIDTLD
VRPIRVIDFRDALRQVKASVSDRDLALYLDWNNKFGSGK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggacagacccgcaccgcctgaccccatggagtccgtggtgcagagcctgatcgcggag
acgaactggcagctttcagcgcaagccatggatgacctgggcggtctcaataacctggcg
aatctcacgctcgatctaactcagcgcactcatccccacttcaaagtctgcaaatggaaa
tggaagtccgccctcaagcgagatcaattcgaaacagcttgttcggccacgcctcagaca
gaactttcggtccgggacgctcaagtgtggcgagcctggctccaaaaagcccaacgagaa
tggtatcaaccccagaaagatgcacccaatacgattgaggctccacgctccgatcgaccc
gtcccaccaccaatagttcatgccccgcctactgccggtccgccgggcgttcgaaagaag
gcaacgctagaccaatggctcacacctgcgggcccaagtggagccggggccacttttggc
ctcaagcgaggtctgaatccggtcgaagatcagaatcgggggtccagtgagcccaagaaa
agaaatttcgggttgggggcgttcggatttgatccccccgctaatgcacctccgacgccg
ttcgcttcttatgatgccagtggtgccatgggtcggaaacccaaattcgggttatgtccg
gccatggaggccgacgcctctcgggcctcttcgttgcataggactgcgacaccgaggctg
cccgaaagggtcgaaaatgccgatacaccccgccccaatccgtttcgcacggccagcgag
caacttgtggtcaattatcaacgccaagggcgactgccacagagttcgacccagacaggc
ccctcgtcggccactttgatgaagaaaagtttaggcgtagccaagccctcgggatatggc
tcatttcgctccccggtggtgagcggtcatgaaaccaatccgacttccacccctctggtc
tcgacttcgaatgtggaaaaaccttcgtcatccaccgaaattgaggtgacggacgaacgg
tataagaacgttgatccaaaaatggtagaactcatcgaaaatgagatcatggatacggga
tcggctatagtttgggaggatattgccggtttagacttcgtaaaaaccacggtaaaggag
attgtggtgtttcccatgcttcgcccagacattttcaaaggactccgagcaccccccaag
ggtctcttactttttgggccccccggtacgggcaaaactttgatcggcaaatgcatcgcc
tcgcagtcaaattccacgttcttctctattagtgcttcatctcttacttctaaatgggtt
ggagaaggagagaaaatggttcgtgccttgtttgctgtggcctctgttcgccaaccgtcg
gttgtcttcattgatgagattgattcattgttgacacaacgctcggataccgaacacgag
agctcaagacggattaagaccgagttcctcgtacaattggatggagccacaacccaaggt
gacgagcgaattctggtggtgggggccacgaatcgacctcaagagttggacgaggccgcc
aggcgaagactagtcaagcgactttatgtaccgctaccagaagctgaggctcgatttcaa
atcattcagcgcctaatggtgaaggagcgtcacgaactctcaagagaggacatgatggaa
attgtccaggaaacggatggatattcaggagccgatatgactaatttgtgcaaagacgca
gccatggggcccatacggagtctggactatagcaaaatcgaatcaatcgacaccctggat
gttcggccaatccgcgtaatcgattttagggatgcgttgcggcaagtcaaggcatcggtg
tcagaccgtgatctcgccctgtacctcgattggaacaacaagtttggcagcgggaaataa
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