Tigriopus californicus (tidepool copepod): 131885219
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Entry
131885219 CDS
T09700
Name
(RefSeq) guanine nucleotide exchange factor for Rab-3A-like
KO
K16779
Rab-3A-interacting protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131885219
03036 Chromosome and associated proteins [BR:
tcf03036
]
131885219
Membrane trafficking [BR:
tcf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
131885219
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
131885219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec2p
ATPD_C_fung
Motif
Other DBs
NCBI-GeneID:
131885219
NCBI-ProteinID:
XP_059089160
LinkDB
All DBs
Position
8:12832158..12836845
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AA seq
527 aa
AA seq
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MEAIEEASSSSSESSTSSRSTSKAQSRAAVSDQSGDITTGSTTKTSFLSVSSSSSPSSSS
SSNLLLLSVANLEDRSLPNSKESNYQSHVRGHHPTCDNKYPSEQVGGGGISDFDVKPEQC
CLTLNPSEPSSLTSNSSSTSSTYSSSSEGERELNLNQRKASQLRMAQIMDSASSSTSSPS
TSMANNNVQENDKGVSSPMSGGHLEVELKSAKDTIKLKDLEIAKLSRIRQDVESELEDLT
ASLFEEAHKMVRDANVKQASAEKVAAEAHMKIEGLETEVAALKTLVLTSTPSQPNKHLHP
QLDPKRSKKKSKVDLGTISPPSSAPSSKSNSLNRGCQLESGSYNCSGSTSSNSISLGGGD
HDDDVDGGHTHQPMKLIDPILRKEFISWKKTPTLETTHPFMERIYQEDIHLCLAFVNRDL
SKQVLAAIQANTVCLDPVKDFSNVPRDCALLQSPVLCKYVLKLNLGHEEDHFISQLARNR
IASVCDCINYLRYIVQGLVKSHVNDVYWEVMHLRGKMALARLGFSPD
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaggccattgaggaagccagcagctcctcgtcagagtcttcaacgtcttccaggtcg
acctccaaagctcaatctcgggcagctgtttctgatcaaagtggagacatcaccacggga
tccaccaccaagacgtcctttttgtctgtatcatcctcctcttccccctcgtcgtcgtcg
tcgtcgaatctccttctcttgtcggtggctaacttggaggacagatctcttcccaattcg
aaggaatcaaattaccaaagccatgtcagagggcatcatccaacttgtgataacaaatac
ccgagtgaacaagttggtggtggtgggatttcagactttgatgtgaagccagagcagtgc
tgcctcactctcaatccaagtgaaccctcctcattgacctcgaactcgtcgtcgacgtca
agcacttactcgtcatcctccgaaggggaacgagaactgaacctcaaccaaagaaaggct
tcccaattgaggatggcacagatcatggatagcgcctcatcttcaacctcgtctccgtcc
acatccatggccaataataatgtgcaagaaaatgacaagggcgtgtcaagccccatgtcc
ggcgggcatctcgaagtggaactcaagtctgccaaagacacgatcaaattaaaagatttg
gaaattgccaagttgtctcgcattcgacaagatgtcgagtcagaattagaagacctgacc
gcctcgttgttcgaggaggctcacaagatggtgcgtgatgccaacgtcaagcaggcctcg
gctgagaaagtggccgccgaggctcacatgaaaatcgaaggcctcgagaccgaagtggcg
gctttgaaaacactcgtcctcacatccaccccgtcacaacccaacaagcacttgcatccc
caacttgaccccaagaggtccaagaagaagtccaaagtggacctcggcaccatttccccg
cccagttcggcgcccagctccaaatcgaactcgttgaatcgaggctgtcaattggaaagt
ggctcctacaactgttccggcagtacgagctctaattccattagcttgggcggcggcgac
cacgacgacgatgtcgatgggggacacactcatcaacccatgaagctcatcgacccgatc
ctgcgcaaggagttcatctcgtggaagaagacgcccaccctggagaccacccatccgttc
atggagcggatctaccaggaagacatccatctttgtttagcgttcgtgaaccgtgacttg
tccaagcaagtgttggccgccattcaagctaataccgtgtgtctcgaccctgtcaaagac
ttttccaacgtccctcgggattgtgctctgctccagagtccggtgctgtgtaaatatgtc
ctgaaattgaacctgggccatgaagaggatcacttcatttcccaattagcgcgcaatcgc
attgcctcggtgtgtgattgtatcaactacttgcgttacatcgttcaaggcttagtcaaa
tcccacgtgaatgacgtctattgggaagtcatgcatttgaggggaaaaatggcgttagct
cggttaggcttctcgcctgattaa
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