Tigriopus californicus (tidepool copepod): 131885310
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Entry
131885310 CDS
T09700
Name
(RefSeq) protein abrupt-like isoform X1
KO
K27896
TTK-type BTB protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131885310
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
131885310
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2
zf-C2H2_4
zf-C2H2_2
zf-Di19
BTB_KLHL33
Zf-C2H2_ZNF451
GAGA
zf_C2H2_ZHX
Zf-C2H2_ZNF451_C
zf-C2H2_FBX41
DUF7066
zf-met
Motif
Other DBs
NCBI-GeneID:
131885310
NCBI-ProteinID:
XP_059089314
LinkDB
All DBs
Position
8:13473347..13491237
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AA seq
700 aa
AA seq
DB search
MASSPQMMLIESTEEGATSSTLEHYSLRWNDYPQTVVATFRNLKEEEDFVDVTLACNSKQ
FTAHKVVLSACSPYFRQLLKTNPCQHPIIILRDIEEEDLKSLLKFMYNGEVRIPEDRMKD
FLRTAETLQIRGLTDGGVTREPCAKNPNSSRVQADMNGAPMSPDHFGPSAAKRHRFNGPD
SRNSPSSSPKSLGDWGRRSLEPKSEEPELDNNNSTPKTESLLSQALEKHSGVSSMYDRSF
RDNGDGRDGDSASDTTSDRPESLMDGLIKSSVAESELHRQLSAGSPASMGNPLFPPGLEA
LYRQAGFPSAFLGLAASASVSGAGSPSGPVTSIPGMPSSAPQVGLQSHAGNPNLAGKLDM
MRVRATDPRPCPKCGKIYRSAHTLRTHMEDKHTICPGYRCALCGTVAKSRNSLHSHMSRQ
HRGISTKDLPVLPMPSPFDPALASRLLAKAGVKVSPRDLAARASPTAPRRSDLPKLDSNL
LQMQSHHFPLPPSLPTSGGMGRGSHDGNRDGVHEIEDLRVSSASSPFGSNGGPGYSHAHH
MRMSQGMLNPKDFAALAAAGGAQPAGGMGSALLDTYLSMIAAAGGESNPMAAALNFQNPA
SRAAAFAAAAAAASGNQSHNGEGKDLDRRSASEDRDDMAGELGSDADNDDLSDNDDGAND
SAASGRRSPNESSMDRDEATASSGPTSTSQNNHATTAASN
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcctcatcacctcagatgatgctgattgagtccacggaagagggcgccacgtcgtcc
acgttggaacactacagcctccggtggaacgattacccccaaaccgtggtggccacgttc
cgcaatctcaaggaagaggaggactttgtggacgtgaccttggcctgcaactcgaaacaa
tttacagctcataaggtggtgctctcggcttgtagtccgtatttccgacaactgctgaag
accaatccgtgccagcatcccatcattatcctgcgagacatcgaagaagaagacctcaag
agccttttaaagttcatgtacaacggcgaagtcaggatcccggaagacaggatgaaggac
ttccttcgcactgccgagacgctacaaattagagggcttaccgatggaggtgtgacccga
gaaccatgtgccaaaaatcccaatagttcaagagttcaagcggacatgaacggtgcgcca
atgtcacccgatcattttggaccttctgctgccaaacgtcatcggttcaatggtccagat
tccaggaactctccctcctcctcaccaaagagtctgggagattggggccggcggagcctg
gaacctaagagtgaagagcctgaactggacaacaataactcgactcccaagaccgagtca
ctccttagtcaggcattggagaagcattctggggtctcgtccatgtacgaccggagcttt
cgggataatggagatggaagggatggagacagtgcaagcgatacaacctcagaccgtccc
gagagccttatggatgggctgatcaagtcttcagtggctgaaagtgaacttcataggcaa
ctgtcagccggctcacccgcctcaatgggcaaccctctatttccaccgggtttggaggcc
ttatacagacaagcaggcttcccttcggcatttttgggccttgcagcaagtgcttcagtc
agcggtgcaggctcccccagtgggccggtaacttccattcctggtatgcccagctcagcc
cctcaagtcggtctccagagtcatgcgggtaatccaaatttggccgggaagttagatatg
atgcgagtccgtgccacagatcccagaccgtgtcccaagtgtggaaagatctatcgatct
gctcacacattgaggactcatatggaggacaagcacacgatttgccccggttaccgatgc
gccctttgtggtactgtggccaagtctaggaactccctacattcccacatgtcccgtcag
caccgaggtatttccacgaaggatctgcccgtacttcccatgccatcgcccttcgaccca
gcccttgcctctcggctattggctaaggccggagtcaaggtatcccctagagacctggcc
gccagggcctcccctactgctcctcgtcgaagtgatctcccaaagctggattccaacctt
ttgcagatgcagtcacaccatttcccactcccaccctcgctccccacctcgggtggcatg
ggtcgtgggagccatgatggaaaccgggatggtgtccatgaaatcgaggatcttcgcgtc
tcgtctgcctcttcgccgtttggcagtaatggtggccctggctattcccatgcccatcac
atgaggatgagccaaggtatgctgaaccccaaggactttgccgctttggctgctgctgga
ggggcccaacccgcaggtggtatgggtagtgcgcttctcgacacttacctgtccatgatt
gcggcggccgggggagaaagcaaccccatggcggctgctctcaattttcagaatcctgca
agccgagcagcggcctttgccgctgccgctgccgcagcctctggcaaccaatctcacaat
ggtgagggtaaggatttagaccggagatcagctagtgaagaccgagatgacatggcaggc
gagttggggtctgacgctgacaatgacgatctgtcggataacgatgacggggccaatgac
tctgccgcctccgggcgtcgctctcctaatgagagcagtatggaccgtgacgaagccacc
gcttccagtgggcccacttccacgtctcagaacaaccacgccacaactgcggcctcgaac
taa
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