Tigriopus californicus (tidepool copepod): 131885387
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Entry
131885387 CDS
T09700
Name
(RefSeq) small nuclear ribonucleoprotein F-like
KO
K11098
small nuclear ribonucleoprotein F
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131885387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcf03019
]
131885387
03041 Spliceosome [BR:
tcf03041
]
131885387
03032 DNA replication proteins [BR:
tcf03032
]
131885387
Messenger RNA biogenesis [BR:
tcf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
131885387
Spliceosome [BR:
tcf03041
]
Complex A
U1 snRNP components
Sm proteins
131885387
U2 snRNP components
131885387
Complex B
U1 snRNP components
131885387
U4/U6.U5 tri-snRNP components
131885387
Complex C
U2 snRNP components
131885387
DNA replication proteins [BR:
tcf03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
131885387
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
131885387
NCBI-ProteinID:
XP_059089402
LinkDB
All DBs
Position
8:10113527..10118931
Genome browser
AA seq
87 aa
AA seq
DB search
MATMPMNPKPFLNSLTGKPVMVKLKWGHEYKGFLVSTDGYMNLQLASTEEFIDGTCTGNL
GEVLIRCNNVLYVRGVEEDDDAQPMAD
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatgcccatgaaccctaagcctttcttgaactcactcacgggcaaacccgtg
atggtcaagctcaaatggggccatgagtacaagggcttcctagtgtccaccgacggctac
atgaacctccaattggcctccaccgaagagtttattgatggcacctgtaccggcaatctg
ggcgaagttcttattcggtgcaataatgtattgtacgttcgtggcgtcgaggaagatgat
gatgctcagccgatggcagattga
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integrated database retrieval system
