Tigriopus californicus (tidepool copepod): 131885715
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Entry
131885715 CDS
T09700
Name
(RefSeq) cytoplasmic dynein 1 light intermediate chain 2-like isoform X1
KO
K10416
dynein cytoplasmic 1 light intermediate chain
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04145
Phagosome
tcf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
131885715
09142 Cell motility
04814 Motor proteins
131885715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131885715
03036 Chromosome and associated proteins [BR:
tcf03036
]
131885715
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tcf04812
]
131885715
Membrane trafficking [BR:
tcf04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
131885715
Chromosome and associated proteins [BR:
tcf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
131885715
Cytoskeleton proteins [BR:
tcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
131885715
BRITE hierarchy
Motif
Pfam:
DLIC
G-alpha
AAA_14
AAA_29
Roc
PduV-EutP
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
131885715
NCBI-ProteinID:
XP_059089828
LinkDB
All DBs
Position
8:complement(5003205..5007639)
Genome browser
AA seq
549 aa
AA seq
DB search
MDDVPPLVPPPAHTMESEPQHRTHHQPNHSTANNNHSHTINSSKSNVHKESENLWATVLS
EVQTNRNAQLPSSKNLLVLGDKESGKTTLIAKLQGNEDPKKGAGLEYSYIDVRDEYRDDM
TNEEYLEYWLLPPWDHTRLGVWTLDGDTSHVNLLKFALTESNFTDTSVVICVSMMAPWNI
MDQLQNWASLLQDHIDKLSLSAERTLELQNENRRIWQSYVEPGDDTEATSSSPTKRISRN
LEFEPEEDLLPLPENTLTRNLGLDLIVVVTKTDYMSDLERDYDYKEEHFDFIQQSIRKFC
LQFGAALFYTSVKDDKNCDVFYKYLVHRIYGFPFKTPALVVEKDAVFIPAGWDNEKKIAI
LFENMHSVKPDQYYTDVIARPIVRKPGAANRDIEVVAEDEQQFLLRQQQYLLQGGAPPPN
LVGGGAGGAPAVQKTPDRKVIGSPGVQGSPKKMEPSKPGVVGPGGAPTSESVLSSFFNSL
LSKKTGQGVPGQPGASIKSPAQADDYKAAAMRSDAAAELDRLTRSQKKVPLPSSGNSSLE
SSVNNTSDC
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgtgccacctcttgttccgccccccgcccacaccatggaatcggaaccgcag
catcgaacccaccatcagcccaatcatagcaccgctaataataaccattctcatactatc
aatagcagtaaatccaatgtgcacaaggaatcggaaaatctttgggccacggttctctct
gaggttcaaaccaatcggaatgcccaactaccctcgtccaaaaacttgttggttctaggt
gataaagaatccgggaagaccacgctgattgccaaacttcaaggaaacgaagatcccaag
aaaggggcgggtttagaatacagctacatcgatgtgcgggatgagtatcgtgatgatatg
accaacgaagaatatctcgaatattggctccttccaccctgggatcacactcgtcttggg
gtttggaccctagatggagataccagccatgtcaatcttttgaaattcgctctgaccgaa
tccaattttacggacacaagcgtggtcatttgtgtgtccatgatggcaccgtggaacatc
atggatcagttgcagaattgggcttctctcctccaagatcacattgacaagctatctctt
tctgctgagcgtactttggaacttcagaatgagaatcgaagaatatggcaaagctatgtg
gaacctggagatgatactgaagcgacctcttcatcacccacgaagagaatcagtcgcaac
ttggaatttgagcccgaagaggatctgcttccattacccgaaaacactttgacgcggaat
ctgggtcttgatctcatcgttgtcgtcacaaaaacggattacatgtccgacttggaacgt
gattatgactacaaggaagagcatttcgacttcatccagcaatccatccgcaaattttgt
cttcaatttggagcagccttattttacacatctgttaaggacgacaagaactgcgatgta
ttctacaagtatctagtccaccgcatctatgggtttccattcaagacacccgcattggtt
gttgagaaggacgcagtattcatacctgccggatgggacaacgagaaaaagattgccata
ctgttcgaaaacatgcacagcgtgaaaccagaccaatattatacagatgttatagccagg
ccaattgttcgaaaacctggcgctgctaatcgtgatatcgaggtggttgctgaggatgag
cagcaattccttctccgccaacagcaatatttgctacaaggcggagctccgcctccaaat
cttgtgggaggcggagcaggcggggccccagccgttcagaagacccctgatcgtaaagta
atcggttcgcctggcgtccagggctcgccaaagaagatggaacccagtaaacccggcgta
gtgggaccaggtggagcacccacatctgaaagcgtcctttctagcttcttcaattcgttg
ttaagcaaaaaaactggccaaggcgtgcctggccaacctggagcatccatcaaatctccc
gcccaagctgatgactataaagcggctgcaatgcggtcagatgcggcggctgaattggat
cgactcacacggtcgcagaaaaaagttccacttccatcatcggggaatagttccttagaa
agttcagttaacaatacttcagattgttga
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