Tigriopus californicus (tidepool copepod): 131885763
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Entry
131885763 CDS
T09700
Name
(RefSeq) E3 ubiquitin-protein ligase MIB1-like
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcf04121
]
131885763
Enzymes [BR:
tcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131885763
Ubiquitin system [BR:
tcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131885763
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
SH3_15
Ank
MIB_HERC2
Ank_5
Ank_4
zf-C3HC4_3
Ank_3
Ank_KRIT1
ZZ
zf-C3HC4_2
Prok-RING_4
Sina_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
131885763
NCBI-ProteinID:
XP_059089896
LinkDB
All DBs
Position
8:4324932..4369042
Genome browser
AA seq
1141 aa
AA seq
DB search
MEGTPPLNPVPAAAVALEAGVTPTLAPLAPNNPTPTPALVLNSAVLAGPLTTGALASGTS
VGHGGITAGAGGTGSASRSTRFMMEGVGARVIRGVDWKWGKQDGGEGHVGTVRNFESPEE
VVVVWDNGTAANYRCSGAFDLRILDSAPTGIKHDGSMCDTCRQQPIFGIRWKCAECSNYD
LCSSCYHGDKHHLRHRFFRITSIGTERVLLEPRRKSKKIPIRGIYPGARVIRGVDWQWED
QDGGNGRRGKVTEVQDWSASSPKSAAYVIWDTGAKNLYRVGFEGQADLKAVSDAKGGTVY
KDHLPLLGESGPGRSGPHGLQVGDQVNIDLELEIVQHLQHGHGGWTDGMYECLGQTGTVA
GIDEDHDIVVSYTSGNRWTFNPAVLTKVAGPPLAPLASNLAASFSTPFSASGSVDERGAG
GGGGGQQHFSVGDLVQICSDVERMKVLQRGHGEWAEAMAPTLGMIGRVQQIYHDNDLKVE
VCGTSWTYNPAAVAKVANDGSIPGASSGDRLSALLKKLFETHVSGDVTEELVKAAANGDA
QKMEELLGREECNVNGVFAGHTALQAASQNGHAEVIRILIRHKAELEIEDKDGDRAVHHA
AFGDEATIMELLTHAGADLNARNKRRQTALHIAVNKGHVGVVKTLLDLQCHPSLQDSEGD
TPLHDAISKKRDDMLALLLEKNADILVTNNNGFNTLHHAALRGNPSAMRVLLSKLPRPWI
VDEKKDDGYTALHLASLNNHVEVAELLVHMGRANMDLQNVNLQTALHLAVERQHTQIVRL
LVREGCNLNITDKDGDTPLHEALRHHTLSQLRQLQDMQDVGKLLICLGSQGADKKSSASI
ACFLAANGADLGVKNKKNQTPLDLCPDPNLCKALSKCQKENAPSNQMAGLIRGDGMTETS
PDEQANLDECLVCSDQKRDILFVPCGHITVCHTCSQRVKKCLLCREFVDDRRKIEDCLVC
SEASANILFKPCNHMVSCENCASIMKKCVECRSPIEDCVPFDVCCGGKIANQEVKQSNLK
DSEVSPGAALPPGAVAGRVASSAAVATAAPAALGLSEATGITPSGGASSVNPGNPEGSNT
NVQKLQEQLNDIKEQTMCPVCLDRLKNMIFLCGHGTCQMCGDRMSECPICRKTVERRILL
Y
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggagggcacacctccacttaatcccgtacccgctgccgctgtagctttggaggctggg
gtgaccccgacattggcccctttggcgcccaataacccgacgccaaccccggccctggtc
ttaaactcggccgtgttggcgggtcccctgacgacgggcgccttggcctctgggacgtca
gtgggtcacggcggaataacagctggagcgggtgggaccggcagtgcttcgcgttccact
cgattcatgatggaaggcgtgggcgcccgggtgattcggggcgtggactggaaatggggc
aaacaggatggtggtgaaggtcacgtggggacagtgcgaaactttgaatctcccgaagaa
gtggtggtggtttgggataatgggacagcggccaactatcgttgctcaggtgccttcgac
ttacggatcttggactcggctcccacgggaatcaaacatgacggctccatgtgtgacacc
tgccgacaacagcccatcttcggcattcgttggaagtgcgccgaatgctccaactatgac
ctctgcagctcttgttatcacggcgacaagcatcatcttcgacatcggttcttccgcatc
acctccattgggactgaaagggtattactcgaaccccgacgcaagtcgaagaaaatccca
attcgaggcatatatcccggagctcgcgtgatccgaggcgtagattggcaatgggaggat
caagatggaggaaatggccgccgtggcaaggtcactgaggttcaagattggtcggcctcc
agccccaaatctgcggcttatgtgatttgggacactggggccaagaatttatatcgcgtg
ggatttgagggtcaggccgacttgaaggcggtttctgatgccaaaggagggactgtatac
aaagatcatttgccgcttttgggagaaagcggaccgggccgatcgggtccgcatggactt
caggtcggcgaccaagtgaatatagacctagagctggaaatcgttcaacacttgcagcac
ggacatggagggtggactgacggaatgtatgaatgtttgggacaaactggaaccgtggct
ggaatcgacgaggatcatgatatcgtcgtatcctatacatctggaaatcgctggactttc
aaccccgccgttcttactaaggtcgctggtcccccattggcacctttggcctcaaatctt
gccgcctcgttctcaacccctttctcagcctcggggtcggtggacgaacgaggagcggga
ggaggcgggggaggtcagcagcatttctccgtgggcgacctcgtccaaatctgctctgat
gtcgagcgaatgaaggttcttcaacgaggtcacggcgaatgggccgaggccatggctccc
actctgggcatgattggtcgcgtacaacagatttatcacgataatgacctcaaggtagag
gtgtgtggcacctcctggacttataacccagccgccgtggccaaagtggccaatgatggg
tccattcccggagcctcgagtggagatcggctctctgctctcctgaagaagctctttgag
acccacgtgtctggtgacgtgaccgaggagctggttaaggctgcggccaacggggatgcg
caaaagatggaggaattacttggaagagaggaatgcaatgttaatggggtctttgctgga
cacactgctttgcaggcagcctctcaaaatggacacgctgaggtgattcgaattctcatc
cgccataaagccgaacttgagattgaagacaaagacggcgaccgagccgttcatcatgcg
gcctttggtgatgaggccacgattatggagctattgacccatgctggagcggatttgaac
gcccgaaacaagcgacgacaaacggccttgcacattgccgtgaataaaggacatgtgggt
gtggtgaagaccttattggatttgcaatgccatccttccctgcaggactccgagggagat
acaccgctgcatgatgccatttctaagaagagagatgatatgttggctcttcttttggaa
aagaatgccgatatcttggtcactaataacaatggcttcaatacacttcatcacgcagcc
ctgcgaggaaacccaagtgctatgcgagtgctcttatccaagttgccccgtccgtggatc
gtggatgagaagaaggacgacggttacacggctttacacctggcttcgctcaataaccac
gtggaagtggccgagctcttggtccatatggggcgagctaacatggaccttcagaatgtg
aaccttcaaacggccttgcacttggcagtggaacgacaacacacccagattgttcgactt
ctggtcagggaaggttgcaatctgaatatcacggacaaggatggagatacgccccttcat
gaggctcttcgacatcataccttatctcagctcaggcaacttcaagacatgcaagatgtg
ggcaagttgctgatatgtttgggaagtcaaggtgcagataagaaatcctcggcctccatt
gcatgtttcttagctgccaatggagcggatctgggcgtgaagaacaagaagaaccagact
ccattggatctttgcccggacccgaatctgtgcaaggccttgagcaaatgtcagaaagag
aacgctcccagcaaccaaatggccggattaatccgaggtgatggcatgaccgagacgtct
ccggatgagcaggccaatttagacgagtgcttggtgtgttctgatcagaaacgagatatt
ctttttgttccatgcggtcatatcaccgtgtgccacacttgttcccaacgggtcaagaaa
tgtttactttgtcgagaattcgtggatgaccgccggaagattgaggattgtttggtttgc
tcagaggcttcggcaaacatcttgttcaaaccgtgtaaccatatggtatcgtgcgagaat
tgcgcctcgatcatgaagaaatgtgtggaatgccgatcgcccatcgaggattgtgtgccc
tttgacgtttgctgcggtggaaaaattgctaaccaagaggtgaagcaatcgaaccttaag
gattcggaagtttctccaggggccgctttgcctccaggcgcagttgcaggaagagtcgcc
tcatctgcggctgtggccacagccgcacctgccgctcttggtttgagtgaggccacgggc
attaccccttcaggaggtgcttcatcagtgaatcctgggaaccctgaaggttccaatacc
aatgttcaaaagctccaagaacagttgaatgatatcaaggaacagactatgtgcccggtt
tgtttggatcgtttgaagaacatgatcttcctctgtggtcatggtacttgtcaaatgtgt
ggagatcgaatgtcggaatgcccaatttgtcgaaagaccgtggaaagacgaatcctgctc
tattga
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