Tigriopus californicus (tidepool copepod): 131885837
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Entry
131885837 CDS
T09700
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8-like
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04137
Mitophagy - animal
tcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131885837
04137 Mitophagy - animal
131885837
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tcf01002
]
131885837
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcf04131
]
131885837
04121 Ubiquitin system [BR:
tcf04121
]
131885837
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131885837
Peptidases and inhibitors [BR:
tcf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131885837
Membrane trafficking [BR:
tcf04131
]
Endosome - Lysosome transport
Others
Others
131885837
Ubiquitin system [BR:
tcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131885837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
131885837
NCBI-ProteinID:
XP_059089998
LinkDB
All DBs
Position
8:13695518..13699079
Genome browser
AA seq
1045 aa
AA seq
DB search
MPELKALYLARDLSQLNQETVLSPALMKSKAQSLLNSMSRLSRECERFEAQGDQEQAYVL
AMRAFQLITLIRQKPDYVKDKKYFDGMIGPTTTHKLILKCESLSQALKERYEKRKAQTRL
PDPGPQIQPSVDQDPDPPPPTAHPDPGPASHHRPSIEAKALKRLMDQRSTAFLLLDVRPR
ADFEATHIKHPYVLNVPGEVLVPGVTARHVERGLRVQDRLDWPKRLSVDRLILLDWQSSQ
IEANSPLQYLRDAMMQWDETNHRYKCAEPWILVGGHEAFALHYPMAVSNPKLARAPKPAQ
RPTLAGLGDLSSLEYPDLDQGFIQTPSPERTPSLMSSASSTILASGAVTVTQSLGPTPVI
PDRQAKPKAVHFQPPSQIESLPNSSTSSVSSLDKGFLISDVSSSQPPLIPSRALKAKVLI
AQSDPRRTMQDVLEAEQDLVEDSIQIEKKSLALEKDWELLRLRREREHDDVMRSELLKKE
EALLEQLEKVHLESDEREQENRELREQLKDMKDQMDRQVQKSQAFDREMAEQRQREQIRA
REREQTEIKRELEKKRQERRAAEERHIHQEKEELERRAREAAAKRKEVERELEARRLLQQ
QQQQQQQRRQLELQKQKQKQQEQSQSPQRSMPKSDTYKMPLKDDSESSFGSLNRSHSSPN
IAQLLADEEEEGRSFDFPRPKIDRLAKPGMSSSFGGARNFQPVWKSNQEKGLTGLKNLGN
TCYMNSVLQCMSNFPILAQFFMESNFQKQINKKSRTRGEFAVEFSELLRQLWSGQCKSIS
PKDLKRTFGKHVESFQGTKQQDAHEFLTKLVESLHDDLNEIQVNMKLPEIDYDQMGEISG
ARKAWELAKKIDKSFIHELFYGQMKSSLKCLSCGFESPKYETFFQLSLNLPLDSSKCTVR
DCLERYLEPESVEWACPKCKRSGMNHKKLDIIKFPLILIIHLSRFFHDEYGFSGKKQNRV
EFEINGFSVGQYARACGGKENRYMDYQLQGVCNHFGTLEGGHYTAYCFSQAYNSWFKYDD
HEVTSMSVSNVKSPAAYMLFYAANI
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctcaaggcgctgtacctggcccgggacctgtcccaactcaatcaggagacc
gtgctgagcccggccttgatgaagtccaaggcccagtcccttctgaactcgatgagccgc
ttgagccgcgaatgcgagagatttgaggcccagggcgatcaggagcaggcctacgtgttg
gccatgcgggcctttcagctcattacgctcattcgtcaaaagcccgactatgtcaaggac
aagaagtacttcgacgggatgatcgggcccaccaccacccacaaactgatcctcaagtgc
gagagtctgtcgcaggccctcaaggaacgctacgagaaacgaaaggcgcagacgcgcttg
cccgatcccggaccccaaatccaaccgtccgtggaccaggatcccgatccgcccccgccc
acggcccatccggaccctgggccggccagccatcaccggcctagcattgaagccaaggcg
ttgaagcgactcatggatcagaggtccaccgctttcctcttgttggacgtgcgacctcgg
gccgattttgaagccacccacatcaagcacccgtacgtgttgaatgtgccgggcgaggtg
ttggtgcccggcgtcacggccagacacgtggaacgaggcttaagagtgcaggaccgactg
gattggcccaaacggttgagcgtggatcgtttaatcttgttggattggcagagctcccaa
atcgaggccaatagcccgctccaatatctgcgggatgccatgatgcagtgggacgaaacc
aatcaccgttataagtgtgctgagccctggatcttggtgggcgggcacgaggccttcgcc
ttgcattatcccatggctgtcagcaatcccaagctagcgcgggcccccaaacccgctcaa
cgacccacattagcgggtctgggcgacctgtcctctctggagtacccggacctggaccag
gggttcatacaaaccccgtctccagagaggactccgtcgttgatgagctccgcctcctcc
actattctggcttcgggtgccgtaaccgtcactcagagccttgggcccacgcccgtgatt
cccgatcgacaggccaaacccaaagccgtgcatttccagccccccagtcagatcgaatcc
ctgcccaatagcagcacatcgagtgtcagttccctagacaaaggatttctcatctcagat
gtgagttcgtcccaaccccccttgattcccagtcgagccctgaaggccaaggtgctcatt
gcccagtccgacccccgtcgaaccatgcaagatgtgctggaggcggaacaggatctggtc
gaggattcgatccaaatcgagaaaaaatccttggccttggagaaggattgggagctgtta
cggctccgacgtgaacgcgagcacgacgatgtgatgcgatccgagttgctcaagaaagaa
gaggctctcctggagcaattggagaaagttcatctcgagagcgatgagcgcgagcaggaa
aaccgagaactgagggaacagctcaaggacatgaaagatcagatggaccgacaagtccaa
aagagccaagccttcgatcgcgagatggccgaacaacggcaacgcgaacaaattcgtgcg
cgggaaagagaacagactgaaatcaaacgagagttggaaaagaagcgacaagagcgccga
gcggctgaagagcggcatatacatcaagagaaagaagaattggagcgacgagcccgtgaa
gcggctgccaagcggaaagaggtagagcgtgagctcgaagccagacggctattacaacaa
caacaacaacaacaacaacaacgacgtcaactggagttgcagaagcaaaagcaaaaacag
caggagcaatcgcaatcgccccaaaggtcgatgccaaagagtgacacctacaagatgccc
ttgaaggacgactcggaatcgagtttcgggtccttgaaccggtctcactcgtcgccgaac
attgcccagttgttggccgatgaggaggaagagggccgttcgtttgactttccacggccg
aaaatcgatcggcttgccaagcctgggatgagttccagtttcggtggagcgcgaaatttc
caacccgtttggaagagcaatcaagaaaaaggcctcactggtctcaagaacttgggcaat
acctgctacatgaacagtgtgctccaatgtatgtcaaactttcccattctcgcccagttt
tttatggagtcaaactttcagaaacagatcaacaagaaatcccggacccgtggtgagttt
gccgtcgagttctccgagctcctccgtcagttatggagcggacagtgcaagtcgatctct
cccaaggatctaaagaggacattcggcaaacacgtggagagttttcaagggaccaagcag
caagatgctcatgagtttctgaccaaactagtggagtcacttcacgatgatttgaatgag
atccaagtgaacatgaagctccccgagatcgattacgatcaaatgggtgaaatctccggc
gctcgcaaagcgtgggagctggccaagaaaatcgacaagtccttcattcatgagctcttc
tatggacagatgaaatcctcgctaaagtgtctctcgtgtggtttcgagtcgccaaagtat
gagaccttcttccaattgtctcttaatctccccttggacagttccaaatgcactgttcga
gactgcttggagcgctatcttgagcccgagagtgtcgaatgggcgtgtcccaagtgcaag
cgcagtggcatgaaccacaaaaaactcgatatcattaagttcccgctcattctcatcata
catttgtcgcggttcttccacgatgagtacggattctcgggcaagaagcagaatcgagtg
gaattcgaaatcaatggcttcagtgttggccaatatgcgcgagcttgtggaggcaaagag
aaccgctacatggattatcaattacaaggggtttgcaaccactttggtacattggaaggg
ggacactacacggcgtattgcttctcgcaggcctacaacagttggttcaagtatgacgac
cacgaggtcacgtctatgagcgtgtccaatgtgaagagcccggccgcttatatgcttttc
tacgcggccaatatttag
DBGET
integrated database retrieval system
