Tigriopus californicus (tidepool copepod): 131885843
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Entry
131885843 CDS
T09700
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
131885843
Domain-containing proteins not elsewhere classified [BR:
tcf04990
]
Other domain-containing proteins
Patched domain-containing proteins
131885843
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
SecD_SecF_C
ACR_tran
MMPL
Motif
Other DBs
NCBI-GeneID:
131885843
NCBI-ProteinID:
XP_059090006
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All DBs
Position
1:2030645..2034446
Genome browser
AA seq
920 aa
AA seq
DB search
MIWNIGAIFAYLHMGDRLTRFFGKLGYLLGRKRELTFLLNFSTLLSTSYWVYTIYLPYMR
YETDIEKLFIPKTAMAWQEREIAGRYFPVDYQDYHPGHEIKMNPGLNLLIQPKDNQSVFR
TEVWLDIMTINNQVVNLVHLKSGEGFQHLCVKRDNICLINDVLELFDYIQAIKSGTLVLD
FPKMSNPVSGNDYFLPAHFGHVVLNPEETHLIDAFSMKLYYSLSAAPDQLNLSRTWEVEV
ANWAQSQNFTTIQIDVLHSQSLQQGLVANIDSAFNYLDVTVALVTLYITFNSMNSKFGLT
MILVSLLGLLNTVLCMFFAFALTMKMGYDWQAINLASVFLLLGVGLDDTFVMLSSWRKSK
HISYIPHRLSHCYQEAGVSITITSLTNIISFMIGALVPGFPCVEIFCVYAGSGLLAIYLG
TLFIFGPGLAFLYSIQDGLLRKLPKLKKLELKCVTKLPTGNDMFQTYLGVPLTKSWTKVV
VLIIWITYFTLAVIGSFNLGYGLEPKNLMRRDSRMFSYLQDHFIAFHHFAYRIQVIFYDE
LDYSDVKVQQEMFRVLDNIKSSPRMSNNSKIEENWLTSFLDSPFSPEEDDPPEQFIMNLK
KFLVEFKSAPVSHNVKFNNNGTRILASRIVVQSSSIKDSVEEQKLMLDLRDVAQLSHLSI
AIHNPFFILYDQSNHVVYSTSTSGFCCVTAMFFVALFFIPRPFSSCMIVLAIISILMGIL
GGMFLADIKVDVISMINIIISIGFSVDFSAHITHHFISSVDMDPNERIKSSLEAFGMPII
QSALSTILGVMPLFFIDSYILQSFATMMTLVICLGTIHGLVFLPVGMCTFLLGMRYCHGK
SVRECKPEILRMANLAFDPDETIRGVHDQTSPKSTRAEPDTDPSKCECDRESKLSTLYES
VGNANESSVDSFGDNSTIYI
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgatctggaatatcggggcaatatttgcttatctgcatatgggagatagactcactcgt
ttctttggaaagcttggatatctattggggcgaaagcgagaattaacgtttctattgaac
ttttccactctcttgagcacgtcgtattgggtgtacaccatttatctcccttacatgcga
tatgaaacagatattgaaaagttattcatcccaaaaactgcaatggcatggcaagaacgt
gaaattgctggaagatattttccggtggattaccaagattaccacccaggccacgagatc
aagatgaacccaggattgaatctccttattcagccgaaagacaaccaaagtgttttcaga
accgaagtatggttggacatcatgacgatcaacaaccaagtggttaacttggtgcattta
aagtctggagaaggttttcagcacctttgtgtcaagagggacaacatttgtcttatcaac
gatgttttagaacttttcgactacattcaggccataaaatcggggacgcttgtgctggat
tttccaaagatgtctaatcccgtgagtggcaacgactatttcttaccggcacattttggt
cacgtggtgcttaatcccgaagagacccatttaattgatgcctttagcatgaaactctat
tactccttaagtgcagctccggaccaactgaacctgagcagaacatgggaggttgaagtt
gccaattgggcacaatctcaaaacttcaccaccattcaaattgatgttctgcattctcaa
agtctgcaacaagggctcgtggccaatatcgattcggctttcaattatctggatgtgact
gtggcactggtcacattgtatatcacctttaactccatgaactccaaatttgggctcacc
atgatcctggtcagcctcttaggccttctgaacacggtgttatgcatgttctttgcgttt
gcactgacaatgaaaatgggctatgattggcaggctatcaatttggcatcggttttctta
ttgttgggcgtgggtttggatgacactttcgtgatgctgtcgtcttggagaaaatcgaag
cacataagttatattccacatagattgtcgcactgttaccaagaagctggagtgtctatc
acaatcacgtccctaaccaacatcattagcttcatgattggagctctcgtgcctggattt
ccttgtgtcgagatattttgtgtttacgcgggatctggattattagccatataccttggc
actctgttcatatttggcccaggtttggcctttttgtactccattcaagatggcttgttg
cggaaacttcccaaactcaagaaattggaactgaaatgtgtcaccaaattaccaacggga
aacgatatgtttcagacttatctcggtgtaccattaacaaagtcttggacaaaagttgtg
gtgctcataatctggataacgtactttactttggcggttattggatcttttaacttggga
tacggattggagcccaaaaatctaatgcgtcgagattcgagaatgttctcttaccttcaa
gaccattttatagcctttcaccattttgcctacaggattcaagtgatattttatgacgaa
ctcgactattcggatgtcaaagttcagcaagaaatgttccgggtcctggataacatcaaa
agctcacctcgaatgagtaataactcaaagatagaagaaaattggctcacttcgttcctg
gatagcccattttctcctgaagaagacgaccctccggagcaattcatcatgaatctgaag
aagtttctggtcgagttcaaatctgccccggtctcacataatgtcaagttcaacaataat
gggacccgaattcttgcgtcgaggatcgttgtgcaaagctcatcgatcaaggactcagtg
gaagagcaaaaattaatgcttgatcttcgagatgtagcgcaactttcccatctttctata
gcgattcacaatccatttttcattctgtatgatcaatccaatcacgtggtctattcaacg
agtacgagcgggttttgttgcgtcactgccatgttttttgtggccctctttttcattccc
aggccctttagcagttgcatgattgtgttggccattatctctatacttatgggaatttta
ggcggaatgttcttggccgacatcaaagtggatgtaatctccatgatcaatatcattatc
agtattggcttctctgtggatttctcggctcatatcacccatcatttcatatcaagcgtg
gacatggatcccaatgaaaggataaaatcaagtttggaagcatttggtatgcccatcatc
caatctgccttgtccaccattttgggcgtgatgcctcttttcttcatagacagctacatc
cttcaatcttttgccacaatgatgaccttagtcatatgtctaggcaccattcatgggctt
gtgttccttccagtagggatgtgtacttttcttttgggcatgcgctattgtcacggcaaa
tccgttcgtgaatgcaaacctgaaatacttcgcatggccaatttggctttcgacccggat
gagacaatccgaggtgtccacgaccaaactagtccaaaaagtaccagagctgaacccgac
accgatccaagtaaatgtgaatgtgatagagagtccaaattgtctactttatatgaatct
gtggggaatgcaaacgagtcaagtgtggattcctttggcgacaactccaccatctatata
tga
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