Tigriopus californicus (tidepool copepod): 131885859
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Entry
131885859 CDS
T09700
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
tcf
Tigriopus californicus (tidepool copepod)
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcf03041
]
131885859
Spliceosome [BR:
tcf03041
]
Common components
Common spliceosomal components
General mRNP proteins
131885859
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
131885859
NCBI-ProteinID:
XP_059090027
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All DBs
Position
8:6572902..6576667
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AA seq
523 aa
AA seq
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MGDDLDVDALLEETYNREQTDKKENGSSDKHRESSERKRDRSRSRDRKDKHGSRSREKSH
RRTRSKSRDRDRRSRTKDSSKRSRSRDRKERRRSRSKERNERRRSRSRDRDQRRKRSRSR
SKDRGPPRPSPRRGLGRGRRSKSKSRSPDVPLTPEERDARTIFIMQLSQRVRSRDVEEFF
SSVGKIRDVKLIICNKTRRFKGIAYVEFKDLESVPLAIGLNGQKLLGVPVIVQPSQAEKN
RTGTYAEPVRVRDKGPMRLYVGSLHFNITEEMIKGIFEPFGKIASMQLIMDPETGRSKGY
GFLTYAEAEDAKKALEQMNGFELAGRPMKVGHVTERTDAPIGPSGLDSEELDRAGIDLGT
TGRLALMAKLAEGTGMKLPQAANQALSSAAAAASVSNTMVSPAMAQQSQLAATNPPIATQ
CFLLANMFDPSTETNPGWDTEVRDDVIEECNKYGGVLHIYVDKTSAGNVYVKCPNVACAV
SAVNALHGRWFAGKVITAAYVPLANYHNLFPDTANSMTLLGGR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgatttggatgtggacgctctcttggaagagacctacaatcgagagcaaact
gacaaaaaagagaacggctcgtctgataagcatcgtgaatcttctgagcggaaaagagac
cgatcccgatctcgtgatcgaaaagacaaacatggaagtcgaagccgcgagaagagtcat
cgtcgtactagaagtaagtctcgagaccgagaccgacgaagccgaaccaaggactcgtcc
aaacgaagtcggagccgtgataggaaggaacgtagaagatcgcgatccaaagagaggaat
gagcgtcggcgaagtaggtctcgagatcgcgatcagcgccgtaagagaagccggtcccga
tccaaagaccgtggaccgccccggcccagtccacgacggggtctcggtcgtggtcgccga
tcgaagagcaagagccgttcccccgatgttccattgacccccgaggagcgagacgcccga
accattttcatcatgcaattgtcacaaagagtacgttctcgcgatgtcgaggagttcttt
tcgtccgtgggcaaaatccgggacgtgaaactgataatatgtaacaaaaccagacgattc
aaaggcattgcatatgtggaattcaaagacttggaatccgtgccactggccattggattg
aatggacaaaagctcttgggtgtaccagttattgttcaaccctcacaagcggaaaaaaat
cgaaccgggacttacgctgagcccgttcgagtccgcgataaggggcctatgcgtttgtat
gtcggatcattgcactttaacatcactgaagagatgatcaaaggcattttcgaaccattc
ggcaaaattgcatccatgcaattgatcatggatccagaaactggtcgatccaaaggctac
ggatttctcacgtacgcggaagctgaagatgccaagaaggcacttgaacaaatgaacggt
tttgaactggcaggtcgacccatgaaagtgggtcatgtcacagaaagaacggatgctcca
attggcccttctggattagattcagaggagttggatcgggccggaatagacctgggaacc
accgggagattagcactcatggctaagttagccgaaggcaccggtatgaaacttcctcag
gccgctaaccaggccttgagtagtgctgctgcagcggcttcggtttcgaataccatggtc
agtccagccatggcccaacagagccaattggcggccaccaaccctcccattgccacgcaa
tgcttcctactggccaacatgttcgacccaagcacagagaccaacccaggctgggacact
gaggtcagagatgacgtcattgaggagtgtaacaagtatggaggcgtattgcacatctat
gtggacaagacctctgccggaaatgtatacgtgaaatgtcccaatgtggcttgcgccgtc
tcggctgtgaatgctcttcacggtcgatggtttgcagggaaagtcatcacagccgcgtac
gtcccattggctaactatcataacttatttccggatacggcaaattccatgactctcttg
ggtggccgatga
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